Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0235 |
Symbol | |
ID | 5298188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 239752 |
End bp | 241041 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640768491 |
Product | tRNA (uracil-5-)-methyltransferase Gid |
Protein accession | YP_001305494 |
Protein GI | 150020140 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGTTA ACATTATTGG TGCTGGATTG GCTGGAGTAG AGGTTGCGTG GAAGCTTTTG AATACAGGAG TGAAGGTAAG GATTTTTGAG CAAAAGCCAA AGAAATTTTC TACTGTGCAT AAAAATCCCA ATTTTGGGGA ATTGGTATGT AGTAATTCTT TAAAATCTGA AAGTTTGAAC AATGCTGAAG GAATACTTAA AGCAGAAATG AATATACTAG ATTCACTAGT TTTAAAATGT GCATACCGAT GTAGAGTTCC TGCGGGGAAG GCATTGGCGG TGGATAGAGA TAAATTTTCT CAGTGTATTA CCGAGCATAT TTTATCATTT GATAATGTGG AAGTTATTCG TGAAGAAATA AAGAGTATAG ATTTAAAAGA AGATGAAATA TGGGTGGTAG CAACTGGACC TACAACAGAT GGAGAATTTG CAAATTGGCT TTCGAATTTA ACTGGAGGTT TTTTAAATTT TTTTGATGCG GTTGCTCCAA TTATTTCTGG AGATAGTATA GATTTTAACA AGTGCTTTTT TGCGGATAGA TATGGCAAAG GAACAAGTGA TTATATAAAT TGTCCTATGA CAAAGGAAGA ATACGAAAGA TTCTACAAAG AATTAATAAA TGCTGAGAAA ATAGAAATGG AGGACTTTGA CAGGAAGCTG CTTTTTGAAA GGTGCCAACC AATTGAGGAG ATAGCCAAAA GTGGAGAAAA ATCCTTGTTG TTTGGCCCAC TAAGACCCGT TGGTTTGATT GATCCAAGGA CAGGAAAAAT GCCATATGCA ATTATTCAAT TAAGAAAAGA AGATGAAAAT GGGAATATGT ATAATTTAGT TGGTTTTCAA ACTAGATTGA AATGGCCTCA GCAAAAGAGA ATAATAAGAC TTATTCCAGG GCTTGAAAAC GCTGAAATTT TAAGGTATGG TGTGATGCAT AGAAATACGT ATATTGATTC ACCGAAAGTG TTGGATGAGT TTTTGAGACA TAAAAAATTT CAAAATTTGT TTTTTGCTGG GCAAATTACA GGTGTGGAAG GGTATGTTGA ATCAGCAGCT ACTGGAATTT TTGTAGGAAT AAATATTTTG AGATTTTTGG AGAAAAAAGA ACTTGTTGCA CTTCCTACGA AGACAATGCT CGGTGCATTG TTAAACTATA TAACAACTTC CAAGCAATTA AAGCCTATGT ATGCTAACTT TGGATTGGTG GATGTGAAGA TGGGAAAGAA AGAAAAGAGG GAAAAATTAC ATAAGATTTG TTTGGAAGAA ATGAAGAAAT TTTTATATAT GTTAAAATAA
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Protein sequence | MIVNIIGAGL AGVEVAWKLL NTGVKVRIFE QKPKKFSTVH KNPNFGELVC SNSLKSESLN NAEGILKAEM NILDSLVLKC AYRCRVPAGK ALAVDRDKFS QCITEHILSF DNVEVIREEI KSIDLKEDEI WVVATGPTTD GEFANWLSNL TGGFLNFFDA VAPIISGDSI DFNKCFFADR YGKGTSDYIN CPMTKEEYER FYKELINAEK IEMEDFDRKL LFERCQPIEE IAKSGEKSLL FGPLRPVGLI DPRTGKMPYA IIQLRKEDEN GNMYNLVGFQ TRLKWPQQKR IIRLIPGLEN AEILRYGVMH RNTYIDSPKV LDEFLRHKKF QNLFFAGQIT GVEGYVESAA TGIFVGINIL RFLEKKELVA LPTKTMLGAL LNYITTSKQL KPMYANFGLV DVKMGKKEKR EKLHKICLEE MKKFLYMLK
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