| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0225 |
|---|
| Symbol | |
|---|
| ID | 5298302 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 231522 |
|---|
| End bp | 232313 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640768481 |
|---|
| Product | tRNA methyltransferase complex GCD14 subunit |
|---|
| Protein accession | YP_001305484 |
|---|
| Protein GI | 150020130 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000107997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCAGAG AGGGAGATAA AGTTTTACTT TATGGAGAAG ATGGAAGTAA GATAATCATT
ACTGTTGAAA AGGGCAAAAA GAAAGGAACG CATTTGGGGC ATGTGAATAT GGATGATTTA
ATTGGGAAAG AGTATGGGGA TTTGATTTTC TTTGGAAAGA AGCAGAGGGC GTTTTATATT
TTACCACCGA CGTTTATTGA CTTGATATTT AATATGAAAA GGAGAACCCA AATAATTTAT
CCAAAGGATG CATCATATAT TTTGTTTAAA CTTGATGTAA AACCTGGAAG CGAGGTTATT
GATACTGGTG TGGGTAGTGG TGCAATGTGT GGGGCGTTTG CAAGAGTTGT GGGAAAAGAA
GGTAAAGTTT ATGGTTATGA GAGAAGGGAA GATTTTTATA ATCTTGCAAA GAAAAACTTG
GAAAATTGGG GATTAAATGA TTTTGTAGAA TTGAAACTAA GGGATATCTC TCAAGGATTT
GACGAAACGA ATGTGGATGC ATTACTTTTA GATGTACCTG ATCCCGATAA TTACATTGAG
AAATGTTGGC AAGCGTTAAA GGGTGGAGGA AAGATAGGAA TTATTTGTCC TACTACCAAT
CAAGTACAGC AAGTTTTAGA AAAACTGTAC GATTATCCGT TTATAGATGT TGAGGTATGG
GAAAATTTAA TGCGACGGTT TAAACCAAAT CCGGAAAGAC TAAGACCATT TGATAGAATG
GTAGCACATA CTACATATCT GGTTTTTGCG ACAAAGGTTT TGAGAAAAAT AGGAGGTGTT
TCTGATGAAT AA
|
|---|
| Protein sequence | MIREGDKVLL YGEDGSKIII TVEKGKKKGT HLGHVNMDDL IGKEYGDLIF FGKKQRAFYI
LPPTFIDLIF NMKRRTQIIY PKDASYILFK LDVKPGSEVI DTGVGSGAMC GAFARVVGKE
GKVYGYERRE DFYNLAKKNL ENWGLNDFVE LKLRDISQGF DETNVDALLL DVPDPDNYIE
KCWQALKGGG KIGIICPTTN QVQQVLEKLY DYPFIDVEVW ENLMRRFKPN PERLRPFDRM
VAHTTYLVFA TKVLRKIGGV SDE
|
|---|
| |