| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0221 |
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| Symbol | |
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| ID | 5298347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 227107 |
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| End bp | 229422 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640768477 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001305480 |
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| Protein GI | 150020126 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.822518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTGAAA AATTAGGGAA TTTTTTGATA AAGAAATCTT TGGTTATTTT AATCACGTTT
AGTATTTTAG GCTTTTTGTT GGGATTATAT AGTATATTCA ATCTAAAGGT TAATGCAGAA
TTAACGGAAC TTGCCCCTGA TAATATAAAG GAGTTTAAGG ATTTAGTTAA ATTTACCGAG
GAAAAGGTTG TCTCAAATAC GTTATTAATA GTAGTTGAAC TTAATAATAA GGTGAACATC
AATGAAGTTG CATTAAGAAT AAAAGATGCG TTTGAAAAGA CGGAATATAT ATCAAAAGCA
GAAGCATTTG ATAATCCGGA AAATTTAATA AAGTATGGGA TATTTACAGT TGACGAGAAT
AGTATAGATA ATATTTTGGG ATATTACAGT GCTGTTGTAA ATGTAGAACC TCGTTCAGTT
ATTGATTTTA GGTTTTGGAG AAATTTAGGA GTTGCAATTT CAACTGTTTC AGACTTTGCA
AATGATTTTT TTTCAAGAAG TGGTATAAAA AAATACTATC TTATATCTGA AGATAAAAGT
TTAATGTTAA TGAATTTTTC AATGAGCAAA CCTGTAACAG ATGTGAACTT TTTAAATGAT
GCCATACCAT TTTTAAAGAG AATTTCCAAA GATATCTCAG ATAAATTTGG AGTTAATATA
TTATTTAGTG GTTCTGCCAT GAATAATTAC ACTGGAAATT TACAGGTTTC AAAGGATTTT
CAAATTACTA CTTTTGTTTC TCTAATTGGA ATATCTTTGT TACTTCTGGT TTCATACGGA
AGTACTAGTT CGATGCTATT TATGTTGTAT TCAATGATTC TTGCAATGGG TACAAGTTTA
GGAATTATAG TTTTTCTGTT TAAAGAGGTA AATATTGTAA CTTCTTTTGT CAATGCAATG
TTATTGGGAC TTGGTATAGA CTATGGGATC CATATTACTG CAAAAATCCA TGAAAATTTA
AGAATTTATG GGAAATCAAC ACAAAGTATA GTAGAAGCGA TAAAAGAAAA TTTTGTGCCT
TCATTTGTTT CAGCAATTAC AACGGCAATT TCTTTATTTG CACTTGCTTT GAGTCCTTCT
AAACCCTTAA AAGAAATGGG AATTTCTTCG GGGATTGGTG TTTTAATATT CTACATTTTT
ATGAATTTTT TAATTCCTGC ATTATATGCA AAGTTCTTTT CGAGAATTAG AATACCAAAA
AGAGAATATT TCTCGAGATT TTTAGAATTT GTCAGAAAAT TTAAACCAAT AACTGTTTTT
GTTTGGGTTG TAGTTTTAGT AACAGGTTTT GGCGCGTATT TTGCAGTTAA GAATTTTTCA
TATACACCTC CTGGACTTGT TCCAGAAAAA TCAGAAGCAA TGATTGCATT AAGTGTTGCA
GAGGAAAAAT TTGGAGATTT TGGAATAGGA CAAGTTGTGC TTGGAGCTGA AAACTTTGAG
GATTTAAAAC GTTTAAAGGA GAAGGTAGAA AATTCAAAAT ATTTTTCAAA TACTTTTTCG
ATTTTATCTT TTATGGATGA TCCATCAAGA TTAAAAGAAA TATCTCCTAC ATTTTACGGG
AAAATTAATC AAATAGTTAG TGAACCGATT TTGGATATAA TATTTAAAAA ATATGGGTTG
TATAACAGTT TAATAGAAAC TTTGAGCTTG TTACAATCTG CCAAAACATT TGAAGATGTT
ATAGCTAGTA TAGAAAAGGA TATGCCATCT TTATTTTTTT ACGATTCAGA TGGGAAAAGG
TATTATTTAT TGTATGCTAA GGAAAAAATA GGGTTATGGA CTAACAATAA TCTAAAAAAG
ATATTTGATG AGGAATTAAA GGGGGAAAGA GTATTTGGGT ATCCTGCACT TTTTTACAAA
GTAATGGTAT ACCTTATTAA TTCAACAACA AAAGCCGTTT ATTTTGTGTT TATGGCAATT
GTATTGACTT TATTAATTGA TCAGAGAAGT TTTAAAAGAT CTTTGCAAAT ATCTTTTTTA
GTCATTTTAT CTATATTGTC TACAATAGGA ATAGGTTATT TTGTATTAAA GATAAATTTA
ACCTTTTTGA ATTTACTAAT TGTACCAATT TTTTTGGGAA TAGGTGTTGA TAGTATGGTG
CATTTAGCAC ATAGTATAAA GCACGGAAGA GAAAGTATAA TGAAAACTGA AAAAGCAGTG
ACTGTATCAG TTTTGACAAC AATGATGGCT TTTGGGAGTT TTATGTTAGC TCAAGGTGAG
TTATTAAAGG AATTTGGCGA GCTTGTAGGG TTAGGTTTAT TAATTTCATG GTTTGTAAGT
ATTTTTGTAT TTTTAAATGG TATTGATAAA AACTAA
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| Protein sequence | MIEKLGNFLI KKSLVILITF SILGFLLGLY SIFNLKVNAE LTELAPDNIK EFKDLVKFTE
EKVVSNTLLI VVELNNKVNI NEVALRIKDA FEKTEYISKA EAFDNPENLI KYGIFTVDEN
SIDNILGYYS AVVNVEPRSV IDFRFWRNLG VAISTVSDFA NDFFSRSGIK KYYLISEDKS
LMLMNFSMSK PVTDVNFLND AIPFLKRISK DISDKFGVNI LFSGSAMNNY TGNLQVSKDF
QITTFVSLIG ISLLLLVSYG STSSMLFMLY SMILAMGTSL GIIVFLFKEV NIVTSFVNAM
LLGLGIDYGI HITAKIHENL RIYGKSTQSI VEAIKENFVP SFVSAITTAI SLFALALSPS
KPLKEMGISS GIGVLIFYIF MNFLIPALYA KFFSRIRIPK REYFSRFLEF VRKFKPITVF
VWVVVLVTGF GAYFAVKNFS YTPPGLVPEK SEAMIALSVA EEKFGDFGIG QVVLGAENFE
DLKRLKEKVE NSKYFSNTFS ILSFMDDPSR LKEISPTFYG KINQIVSEPI LDIIFKKYGL
YNSLIETLSL LQSAKTFEDV IASIEKDMPS LFFYDSDGKR YYLLYAKEKI GLWTNNNLKK
IFDEELKGER VFGYPALFYK VMVYLINSTT KAVYFVFMAI VLTLLIDQRS FKRSLQISFL
VILSILSTIG IGYFVLKINL TFLNLLIVPI FLGIGVDSMV HLAHSIKHGR ESIMKTEKAV
TVSVLTTMMA FGSFMLAQGE LLKEFGELVG LGLLISWFVS IFVFLNGIDK N
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