| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0180 |
|---|
| Symbol | |
|---|
| ID | 5298123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 192261 |
|---|
| End bp | 193283 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640768437 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_001305442 |
|---|
| Protein GI | 150020088 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.504589 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATAG TGTTAACGTG TACTTCTGGT TTAGAAGCGG CAACAGCTCT TGAAGTAAAG
AATATGGGGT ATAAAGTATT AGAATCTGTA TCTGGGAAGA TATATATAAA GGGGGATTTA
AAAGATATCC CCCTTCTTAA TATACATCTA AGAAGTGCAG AAAGAGTATT TATATTATTA
AAAAAGACTG TTGTAAAAAC ATTTGATGAA TTTTACAAGG CTATTTATGA AATTGATTGG
GAAGATTTTG TTCACGGAAA AGTGTATATA TCCGATGTTT CCGTGAGAAA TTCCAAGCTT
TCGGCAAAAG GAGCCATTAT TTCTGTAGCG TATGCAGCTA TTAGGAAAAA GGTAAAAAGT
GAATCAAATG TGAAATTTCC CGTGAGAATA ATTTTAAAAA ATGATGTGCT TTATGTACTG
CTGGATACAA CCGGAGAAAA AGCTTTAAGC AAAAGGGGAT ATAGGTTGAA AACCTCAAAA
GCTCCACTCC GAGAAACAAT TGCGGCTTCT TTAATATTAC TTTCAAGGTG GAAAAATGCA
ACGTTTATAG ATCCGTTTTG TGGGAGTGGA ACCATTCCAA TTGAGGCGGC TTTGATAAAA
TCAAATACAC CACCTGGAAT TTTTAGAAGT TTCGTGTCTG AAAATTGGAA TTTTTTAAAT
TGGCCTGATA GAGGAAAAAG GCTTATAAAT GTTGATGAAA TTTATGGGTT TGACTTAGAT
GAAGAAATTA TTAAGATTGC AAAGGAAAAT GCAAAACGTA TAGGTATAAA GGGTTTGATT
TTTGAAAAAA GGTTATTTGG GACGTATAAT ATGAATAATG TGTGGATTGT GACAAATCCT
CCATATGGTG AGAGATTAAG TTATAATATA GATTTTTCAA AATTTTTGAA GAATTTTGAG
GATTCAAAGT TTTATATTCT TTTTCCTAAT AGAAATTTTG AAAAAATGTT TGGAAAAAAG
GCTACCAAAA AGATAAGATT TCAAAATAGT GGGATTTGGG TTTGGTTTTA TATGTATTAT
TAG
|
|---|
| Protein sequence | MTIVLTCTSG LEAATALEVK NMGYKVLESV SGKIYIKGDL KDIPLLNIHL RSAERVFILL
KKTVVKTFDE FYKAIYEIDW EDFVHGKVYI SDVSVRNSKL SAKGAIISVA YAAIRKKVKS
ESNVKFPVRI ILKNDVLYVL LDTTGEKALS KRGYRLKTSK APLRETIAAS LILLSRWKNA
TFIDPFCGSG TIPIEAALIK SNTPPGIFRS FVSENWNFLN WPDRGKRLIN VDEIYGFDLD
EEIIKIAKEN AKRIGIKGLI FEKRLFGTYN MNNVWIVTNP PYGERLSYNI DFSKFLKNFE
DSKFYILFPN RNFEKMFGKK ATKKIRFQNS GIWVWFYMYY
|
|---|
| |