| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0169 |
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| Symbol | |
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| ID | 5297963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | + |
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| Start bp | 181388 |
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| End bp | 182236 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640768426 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001305431 |
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| Protein GI | 150020077 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0558238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTT TAGAAAATTT TTCGGACTAT TTGGCACATG TAAGAAGGCA TTCTGAAAAT
ACTTTGAAAG CTTATTTAAA GGATGTTAGA AAGTTTCTGG AATATATAAA CAAACCCATT
AAAGAAATTG AAAGAAAAGA TATAGAAACA TTTTTAAAGG CACTTTCCAA GGGAGAAATT
ACGGAAAATA GTCCTAGAGA AACTACTATT TCAAGATATA TCTCAAGTTT AAATTCCTTT
TTTAATTACC TTGAACTTTC TGGTACAATT TCAAATAATC CCATGGAAAG GATTAAACAT
CCAAGACTTA GAAGAAAAAT TCCAGATTTT TTAACAGAAG AAGAAATTAA AAAACTCATA
GATGTTTTTG ACGAAGAAAC AGAAATGAAA AAAAAACTTG CCATTTCACT ACTTTACTAT
GCAGGGCTTA GAATTAGTGA GCTCTGCAAT TTAAGAACAA CAGACATATC TTTTATCCCT
CCTTTTTTAA GAATTGAAAT GGGTAAAGGT AGAAAGGATA GACTTGTACC ACTACCAGAT
AAAGTCCTAC CTTTACTTCA AAAATATCTA GAACTAAAAA ATCCAAAAAT ATATGTTTTT
GAAAACGAAG CAAAACACGT TCATCCATCA ACCGTTTTCA GATGGTTAAA AGATGGTGTC
AAAAGAGCTA AGATAAAAAA ACAGGTTCAT CCCCACACTT TACGTCATTC ATATGCAACA
CACCTGATTA GAAAAGGTGT AAATATAAAA GTTGTCCAAG AACTTCTTGG ACATACTAAT
CTAAGCACTA CAAGTATCTA TTTACATGTT GCCGACCAAG AAAAATTCGA TGCAGTAAAA
AAATTATAA
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| Protein sequence | MDFLENFSDY LAHVRRHSEN TLKAYLKDVR KFLEYINKPI KEIERKDIET FLKALSKGEI
TENSPRETTI SRYISSLNSF FNYLELSGTI SNNPMERIKH PRLRRKIPDF LTEEEIKKLI
DVFDEETEMK KKLAISLLYY AGLRISELCN LRTTDISFIP PFLRIEMGKG RKDRLVPLPD
KVLPLLQKYL ELKNPKIYVF ENEAKHVHPS TVFRWLKDGV KRAKIKKQVH PHTLRHSYAT
HLIRKGVNIK VVQELLGHTN LSTTSIYLHV ADQEKFDAVK KL
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