Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0124 |
Symbol | |
ID | 5296553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 128131 |
End bp | 129852 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640768381 |
Product | ABC transporter related |
Protein accession | YP_001305386 |
Protein GI | 150020032 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAGAG AGTTTTTAAA GAGACGTATT TGGTTTTATT TTGCAGGGGT TATTACACTT ATTGTAGTTG ACACATTACA GCTTATAGTT CCAAAGTTTA TTTCTAGAGC GGTAGATAGC TTGAATGTAG AAACACCGGA TATAGGTGTT GCAAAATTAA TGGCAATTGG AATAATAGGT ATTGCCATTG GTATGTTTTT TACAAGGTTC TTTTGGAGAT TTTTTATAAT TGGTAGTGCA AGAAAATTTA CTTATGAGGC AAGGAAGATT CTATACGATA AAATCTTATC TTTAGATATG TCTTTTTTTG ATAAAAATAG AAGTGGAGAT TTAATGGCGA ATTTTACAAA TGATATGAAC AATATTGAAA GAATGCTAGG CCCTGGAATA GTTATGATGG TAGATGCTTC TTTTATGTCT GTTATAACGT TATTTTTCAT GGCAACAAGT GTGGGTTGGA AACTTACGCT TATTGCGTTA ATTCCTTTAC CATTCATAAT GTTGATATCA CTTGTTTTTG GAAAATTTAT TTACAAAAGA TCTAAAAAAG TACAGGATAC GTTTTCTGAT TTAAGTGGAT TTACCGAGGA ATCAATAGAT GGAATTAGAA TTTTAAAGTC TTTTTCAATA CTGCCAAAGT TTGAGAATTT GTTTTTAGAC AGAGCGAACA GAAATTTTAG AGCAACATTA TCGTTAGTTA AAGTTTGGGG TATTATGTGG CCGCTTATAC ATTTCATAAG TTCTCTTTCT TATTTTATTA CCATAGCCTA TGGAGGACCT ATGGTAATAA ATCAAAAAAT TACCCTGGGT ATGTTTTTTG CTTTTAACAA CTATATTGGA ATGATTGTAT GGCCATTAAC GGCTTTTGGT TGGGTTATTA ATATTATCCA AAATGGTAGG GCTTCATATA CAAGGATTTT GGAAGTTTTA AAAACACAAT CAAAAGTAGT AGAACCTGAT AACCCTGTTG AAATAGATGA AATAAATGAT ATTACAATAA AAAATTTAAA TTACAAATAT CCAGATTCCA ACAGATATGT GTTAAAAGGT GTGAATTTAG AAATTAAAAG GGGACAGTTA GTAGGAATTG TTGGAACTGT GGGTAGTGGA AAATCAACTA TTGTGAAGAT AATAAGTAAG CTATATCCAG TTGAAAGAGG GTATGTGTAT ATAAATGGTT ATGATATTAA CGATATACCT TCTAAAATAG TTAGAACAAA AATTTCCTAT GTACCACAAG AAACATTTTT ATTTTCCACT TCCATAAAGA ACAATATAGC ATTTGGTTTG GATGATTTTG AAGAATGGCA GATTAAGGAA TATGCTATGC TTTCTGCTGT TCATAGTGAT ATAGAAAGGT TTCCGAAGAG TTATGATACA GTTGTTGGAG AAAGAGGAGT AACTTTATCA GGTGGTCAAA AGCAAAGAAT AACAATTGCA AGGGCATTGA TAAGGAATTG TGATGTTTTT ATTTTTGACG ATTGTTTATC GGCGGTTGAT CCTGAAACAG AGGAGAAGAT AATAAGTTCT TTGAGAAAGA GTATGGAGAG TAAAACAATG ATAATTATTA CACATAGATT AAAAGTTTTG AAAGACGCAG ATATAATTTA TGTTTTTGAC GATGGCCAAG TTGTAGAAAG TGGAACACAC AAGCAATTAA TGGAAATTGA TGGGTTGTAT GCAGACATGT ATAAAAAACA ATTAATTGAA GAGAGTTTGT GA
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Protein sequence | MIREFLKRRI WFYFAGVITL IVVDTLQLIV PKFISRAVDS LNVETPDIGV AKLMAIGIIG IAIGMFFTRF FWRFFIIGSA RKFTYEARKI LYDKILSLDM SFFDKNRSGD LMANFTNDMN NIERMLGPGI VMMVDASFMS VITLFFMATS VGWKLTLIAL IPLPFIMLIS LVFGKFIYKR SKKVQDTFSD LSGFTEESID GIRILKSFSI LPKFENLFLD RANRNFRATL SLVKVWGIMW PLIHFISSLS YFITIAYGGP MVINQKITLG MFFAFNNYIG MIVWPLTAFG WVINIIQNGR ASYTRILEVL KTQSKVVEPD NPVEIDEIND ITIKNLNYKY PDSNRYVLKG VNLEIKRGQL VGIVGTVGSG KSTIVKIISK LYPVERGYVY INGYDINDIP SKIVRTKISY VPQETFLFST SIKNNIAFGL DDFEEWQIKE YAMLSAVHSD IERFPKSYDT VVGERGVTLS GGQKQRITIA RALIRNCDVF IFDDCLSAVD PETEEKIISS LRKSMESKTM IIITHRLKVL KDADIIYVFD DGQVVESGTH KQLMEIDGLY ADMYKKQLIE ESL
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