| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0064 |
|---|
| Symbol | cysS |
|---|
| ID | 5297951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermosipho melanesiensis BI429 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009616 |
|---|
| Strand | - |
|---|
| Start bp | 68948 |
|---|
| End bp | 70357 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640768316 |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_001305327 |
|---|
| Protein GI | 150019973 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00940017 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTT ACATAACAAA TACGGAAAGC GGAAAAAAAG AAAAATTAGT TCCAAATACA
CCTGGTGTTG TAAAGATGTA CGTATGTGGT CCAACCGTCT ACAACTATAT TCACATTGGA
AATGCAAGAC CAGCAGTAGT TTTTGATGCT TTTAGAAGGT TTTTGGAGTA TAGGGGTTAC
AAAGTTGTTA TGGTACAAAA TTTTACGGAT ATTGATGATA AGATAATAAA TGAAGCAAAT
GCATGGGGAG TAAATTTTAA GGATGTTGCT GATACATTTA TTGCTGAATA TTGGAAAGAT
GCGGAAAATT TAGGGATTAG AGCTGCAAAT TTCCATCCCA GAACAACTGA TTATGTTAAA
GAAATAGTAG AAGCAGTTGA AAAATTAATA GCAAAAAATT ATGCCTATGT TGCAGATAAT
GGTGACGTAT ATTTTAGTGT GAAAGAATTT AAAGATTATG GTAAACTTTC TGGAAAAAAG
TTAGAAGATT TGGTAGCAGG TGCAAGGGTA GAAGTAAGTG AATTAAAGAA AAATCCTTTG
GATTTTGCTC TTTGGAAGGC TGTGAAACCT GGTGAACCAA GTTGGGATAG TCCATGGGGA
AATGGAAGAC CTGGATGGCA TATAGAGTGT TCTGTGATGT CTCAGAGATT ACTTGGAGAT
TCATTTGACA TCCATGCAGG TGGTGAGGAT TTAATTTTTC CACACCATGA AGATGAGAAA
GCTCAAAGTG AGGCATTAAC AGGTAAACCA TTTGCAAAGT ATTGGATGCA TAATGGAATG
ATAATTACGC GTGGGGATAA AATGAGTAAA TCTATTGGCA ATGTATTTTT AGTTCGTGAA
GCGGTTAAAA GATATGGAAA AGATGCAGTA AAGTTATTTT TACTTTCAAA GCATTACAGG
ACGCCTATAG AATTTTCTCA TGAAATAATG TTTAATACAA AAAAGGCCGC ACTTAGAATT
TTAAATACAT TAAATAGATT TGAAGAAAAA TATCCATATC CACTAGTTCC AAAGAGAGAT
ACATTTATGA ATGATATGGA AGCTAGATTT GTTGAGGCAT TGGAAGATGA TTTTAATACT
CCTAGAGTAA TTGCTTTAAT TTTTGAGTTA TCAAAGGATT TGAATAAGGC AATGGATGAA
GGAAAAGAAG AAGAAGCATT AAAAAGATAT CATTTAATTA CAAGAGTGTT TGGAAGTGTT
TTGGGGATTT TTGAAAGAGG TTTGAAGGTT GTTGAAACAA ACAACCAAAA GATTATTGAA
GAAATTTTGA GTGTAAGACA AGAATTAAGA AAAGAAAAAG ATTACAATGT AGCTGATAAA
ATAAGGGACG CATTGTTGAG AGCAGGAGTT AAAATTCTGG ATACTTCAGA AGGTACAAAA
TGGGAGATGA ATACGGAGGT GGATGAATGA
|
|---|
| Protein sequence | MAIYITNTES GKKEKLVPNT PGVVKMYVCG PTVYNYIHIG NARPAVVFDA FRRFLEYRGY
KVVMVQNFTD IDDKIINEAN AWGVNFKDVA DTFIAEYWKD AENLGIRAAN FHPRTTDYVK
EIVEAVEKLI AKNYAYVADN GDVYFSVKEF KDYGKLSGKK LEDLVAGARV EVSELKKNPL
DFALWKAVKP GEPSWDSPWG NGRPGWHIEC SVMSQRLLGD SFDIHAGGED LIFPHHEDEK
AQSEALTGKP FAKYWMHNGM IITRGDKMSK SIGNVFLVRE AVKRYGKDAV KLFLLSKHYR
TPIEFSHEIM FNTKKAALRI LNTLNRFEEK YPYPLVPKRD TFMNDMEARF VEALEDDFNT
PRVIALIFEL SKDLNKAMDE GKEEEALKRY HLITRVFGSV LGIFERGLKV VETNNQKIIE
EILSVRQELR KEKDYNVADK IRDALLRAGV KILDTSEGTK WEMNTEVDE
|
|---|
| |