Gene Tmel_0029 details

Gene Information

• Locus tag: Tmel_0029
• ID: 5298292
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: -
• Start bp: 32947
• End bp: 33636
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640768279
• Product: hypothetical protein
• Protein accession: YP_001305293
• Protein GI: 150019939

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGAAA ACAACATGTT AATGTGGATA GGTATTGGGG TATTAGCAGC AGCGCTTGTT 
GTTGGGGCAA TTTTCTTTTT ATTGCCAAAA GATAGGTATA TTGAGGCACA AGGTATTAGG 
ATTTGGAAGT TGCCTAAAGA AGCGCAAAAT GTGCAGATTA ACTACTCTCA AGAAGCAAAA 
GTTGCTCAAC TTGCACGTGA AGGAAGGTTA TTTGTATTTG AAGGTGTAAA TGTTGGTGGC 
GGAGTTAATA TGACCATAGC GGAGAATGCG GCAAGGACGC AAGCATTGGG TAAGATAGCA 
GAGTTTTTAA ATGCAAAGGT AGAAACTTTT AGAAAAGTAG TTGAAGGCCA ATTACAAAGT 
GTTCAAACAA ACAATACAAA TGAAGAAGCA AATCAACAAT TAGTTGAAGC AGCTGTAAGT 
GCATACAAAG GTATTACAAA AGTTATGGCC AATGCGATAG TAAGTGGTGC TTTAAAATAC 
GCAAGTTGGG AAGTTAGAAA GGGAAATGTA GTTGAGTTGC ATGTGCTTTA TTTCTACGAT 
CCAACTAACC TTCTTTCAAT ACTTGAATCT CAAGCACTTG TAAGTGAGAC AGTTGGAAAA 
CTTGGAAAGC AGGGAGTGGA TTTCTTTAAA GCTTTAAATT CGGTACTTGA AGAAGCTTCG 
AAAGGGACAC CATTTGAAGA AGAACAATAA 

 

Protein sequence

MSENNMLMWI GIGVLAAALV VGAIFFLLPK DRYIEAQGIR IWKLPKEAQN VQINYSQEAK 
VAQLAREGRL FVFEGVNVGG GVNMTIAENA ARTQALGKIA EFLNAKVETF RKVVEGQLQS 
VQTNNTNEEA NQQLVEAAVS AYKGITKVMA NAIVSGALKY ASWEVRKGNV VELHVLYFYD 
PTNLLSILES QALVSETVGK LGKQGVDFFK ALNSVLEEAS KGTPFEEEQ