| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0023 |
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| Symbol | |
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| ID | 5297648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 24177 |
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| End bp | 25511 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640768274 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001305288 |
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| Protein GI | 150019934 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0179797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG CGAAGAAAAT TTATGTTTGC GAAAATTGTG GTTATGAATC TCCTAAATGG
TTTGGCCGAT GCCCAGTGTG TAATGTTTGG GATAGTGCAA GGGAATTAAA GTTTGAAGAA
AAAGTTAATG CGGGTATTGA TTCCCGCATT TTTTTGCTAA ATGATGATTT AATTGGAGGG
GAAGTAAGAC GAATAAAGAC TAATAAGGAA GAGATTGATG GTTTGTTTGG AGGAGGAATT
GTTCCCGGGC AGGTTATACT GTTAGGTGGA GAACCAGGAG TGGGTAAAAG TACTTTAGCC
CTTCAAATAA GTGATTTAAT ATCAAAAAGA GGAAAAGTTT TATATGTTAG CGGAGAAGAA
AGTATTAAGC AGATAGGTAT TAGAGCAAAA AGATTGGGAA TAAAGAATAA TAATTTGTAT
GTAAGTATTG ATAATGAGTT AGAGGCAGTT TTTGTAAATT TAAAAAAGAT TTCTCCTGTT
TTTGTTGTTT TAGATTCTAT TCAGACTGTT TTTTCTAATA AAGTTGATGG AGTGCCAGGT
GGAATTTTAC AGTTGAGAAC TGTTGTAGAA AAGCTAAGAA AATATTCAAA AGAAAGTGGT
GTTCCCATTT TGCTAATAGC CCATGTAAAT AAAGAAGGGA ATATAGCTGG GCCAAAGTTA
GTTGAACATA TAGTAGATAC CGTTGTATAT TTTGAGGGGG AAAAAACAAC TGATTTGAGA
ATTTTGAGGG TAATAAAAAA CAGATTTGGG CCAAGTGGTG AAATTGCGGT ATTTCAAATG
ATGAATACCG GTCTCGAAGA GTTAAAAAAT AAAGTTTTTA TTGAAGAAAG TAATATGCCT
GGGAATGTTA TTTCATGTGT ATATGAAGGT ACTAGGCCAA TTCTAGTTCA AGTTCAAAGT
CTTGTATCAA GAGATAGAAT TTCAACGTCG AGGCGTATTT CGCATGGAGT AGATGTTAGA
AAGCTAATAA TACTGAGTGC GGTGATATCT AAACATTTGA ATTTACCAAT TGATGCGCAT
GATATATATC TTAACGTATC CGGAGGTATT AAAATTACTG ATCCTGCAAG TGATCTTGCA
ATAGCATCTT CTATTTTATC ATCACTGTTT AATAAATTCT TAGGAAAGGT TGTTGTTATT
GGTGAAGTGG GATTGGATGG TAGTGTTAGA AAAGTTAGAG ATCTTGAAAA AAGGATTGAA
AATGCTAAAA AAGCGGGATT TGAAAGGTTT ATAATCCCAC ATAATAAAAA AGTTTATGGT
AATAAAATAT ATTTAGTAAA AAATATTAGA GAGTTACAAG AAATAATATT TGAGGAGGGA
GAAAATGAAA ACTAA
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| Protein sequence | MSKAKKIYVC ENCGYESPKW FGRCPVCNVW DSARELKFEE KVNAGIDSRI FLLNDDLIGG
EVRRIKTNKE EIDGLFGGGI VPGQVILLGG EPGVGKSTLA LQISDLISKR GKVLYVSGEE
SIKQIGIRAK RLGIKNNNLY VSIDNELEAV FVNLKKISPV FVVLDSIQTV FSNKVDGVPG
GILQLRTVVE KLRKYSKESG VPILLIAHVN KEGNIAGPKL VEHIVDTVVY FEGEKTTDLR
ILRVIKNRFG PSGEIAVFQM MNTGLEELKN KVFIEESNMP GNVISCVYEG TRPILVQVQS
LVSRDRISTS RRISHGVDVR KLIILSAVIS KHLNLPIDAH DIYLNVSGGI KITDPASDLA
IASSILSSLF NKFLGKVVVI GEVGLDGSVR KVRDLEKRIE NAKKAGFERF IIPHNKKVYG
NKIYLVKNIR ELQEIIFEEG ENEN
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