Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3271 |
Symbol | |
ID | 7315499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 3422406 |
End bp | 3424130 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643618172 |
Product | type II secretion system protein E |
Protein accession | YP_002515326 |
Protein GI | 220936427 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGC CCGCAACGTC CGAGGGTCGA CGCAAGATCC GGCTGGGTGA CCTGCTGGTG GAGAACGGCA TCATCTCCGG CAAGCAGCTG GAGGAGGCCC TGTCCGTCCA GAAGCGCACC GGCAACAAGC TGGGACGCAC GCTCATCGAG ATGGGCGTAA TCTCCGAGGA CGCGCTGCTC AACTTCCTGT CCCGCCAGCT CAACATTCCA CTGGTGGACT TGCGCCACTA TCGCTTCAAC AGCGAGCTGC TGCATCGCCT GCCGGAGACC GCCGCACGGC GTTTCCGCTG CATCATGCTG GCGGAGCAGG ATGACGGCTA CCTGGTGGGC ATGGCCGATC CCACGGACAT CTTCGCCCAG GACGAGATCA CGCGGCTGGT CGGCAAGCCC GTGCTGGCGG CGGTGGTGCG CGAGGCGGAC CTGTTGCGCA CCTTCGACAC CGTCTACCGG CGCACGGAGG AGATCAGCGA TCTGGCCGAG GAACTGGGTC AGGAGCTGGC GGAGAGTGAC TTCGACGTGG CCCAGCTCGC TGCCTCCGAC GAGGTGACCG ACGCCCCGGT GGTCAAGTTG CTGCGCAGTC TGTTCGAGGA CGCCGTCCAG GTGAGCGCCT CGGACATCCA TATCGAGCCC GACGAGAACG CCCTTCGCAT TCGTCAGCGT ATCGACGGCG TGCTGCAGGA ACAGGTGATG AAGGAGAAGC GCATCGCCAA CGCGGTGGTG CTGCGCCTCA AGCTCATGGC GGGCCTGAAC ATCTCCGAGA AGCGACTGCC CCAGGACGGG CGCTTCAACA TCAAGGTCAA GAACAAGAGC ATCGACGTGC GACTCTCCAC CATGCCCATC CAGCATGGCG AGTCGGTGGT GATGCGACTG CTGGACCAGT CCACGGGCAT CCTGGACCTG CTGCACCTGG GCATGCCGCC GGACATCCTG GCGCACCTGC GCCGCATCCT GCGCCACCCC AGCGGCATGG TGCTGGTCAC CGGCCCCACC GGCAGCGGCA AGACCACGAC CCTGTACGCC GCGCTGCAGG AACTCAACGT GCCTGACCGC AAGATCATCA CCGTGGAAGA CCCGGTGGAG TACCGGCTGC CGCGCATCAA CCAGGTACAG GTGAACCCGC GCATCGGGCT GGAATTCGCC ACGGTGCTGC GCGCCGCCCT GCGACAGGAC CCGGACGTGA TCCTGGTGGG CGAGATGCGT GACCAGGAGA CCGCCGAGAT CGGCCTGCGC GCCGCCATGA CCGGCCACCT GGTGCTCTCC ACGCTGCACA CCAATGACGC GATCAGCACC GCCGACCGAC TGCTCGACAT GGGCGCCCAG GGTTTCCTGC TGGCCTCCTC GCTGCGCGCC ATCATCGCAC AGCGTCTGGT GCGGCGGGTG TGCGAGTTCT GCGCCGAGGC CCACGTACCC GACGCGCACC AGGCGAGCTG GATGCGCACG GTGCTGGGCG ATGGCGCCGA CTTCTCGCGC CTGCGCCACG GGCGCGGCTG CACCCATTGC AACAACACCG GCTATCGGGG CCGCATCGGC GTGCATGAAT ACCTGGAACC GGACGAGGCC ATGCTCACCG CGTTGCGTCG TTCCCGCATG GACGAGTTCG CCAGGGCCGC CCGTGCCAAT CCCCTGTATC GGCCGCTCAT GCGCGTGGCT CTGGACTACG CCCTGGAAGG CCGCACCAGC GTGGACGAGG CCCAGCGGCT CGCCGCCGAG GTGGAGGTGC ACTGA
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Protein sequence | MNMPATSEGR RKIRLGDLLV ENGIISGKQL EEALSVQKRT GNKLGRTLIE MGVISEDALL NFLSRQLNIP LVDLRHYRFN SELLHRLPET AARRFRCIML AEQDDGYLVG MADPTDIFAQ DEITRLVGKP VLAAVVREAD LLRTFDTVYR RTEEISDLAE ELGQELAESD FDVAQLAASD EVTDAPVVKL LRSLFEDAVQ VSASDIHIEP DENALRIRQR IDGVLQEQVM KEKRIANAVV LRLKLMAGLN ISEKRLPQDG RFNIKVKNKS IDVRLSTMPI QHGESVVMRL LDQSTGILDL LHLGMPPDIL AHLRRILRHP SGMVLVTGPT GSGKTTTLYA ALQELNVPDR KIITVEDPVE YRLPRINQVQ VNPRIGLEFA TVLRAALRQD PDVILVGEMR DQETAEIGLR AAMTGHLVLS TLHTNDAIST ADRLLDMGAQ GFLLASSLRA IIAQRLVRRV CEFCAEAHVP DAHQASWMRT VLGDGADFSR LRHGRGCTHC NNTGYRGRIG VHEYLEPDEA MLTALRRSRM DEFARAARAN PLYRPLMRVA LDYALEGRTS VDEAQRLAAE VEVH
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