| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3230 |
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| Symbol | |
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| ID | 7315603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3378963 |
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| End bp | 3379478 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643618129 |
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| Product | fimbrial pilin related signal peptide protein |
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| Protein accession | YP_002515285 |
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| Protein GI | 220936386 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.591415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAGGG AACATGGCCT TACCCTCATT GAACTCATGG TCACGCTGGC CGTGGCCGCC
ATCCTGATCA CCGTCGCGGT GCCCGGCTTC GGCAGCCTGG TGGCCGAACA ACGGCTCGTG
ACCACCACCA ACCAGTTCGT CACCGCCCTG CACCTGACCC GCTCGGAGGC GGTCAAGCGG
GGTGCCAGGG TGACCCTGTG CGCCAGCGAG GACGGCAGCA GCTGCGGTTC ATCCAACGGA
TACAGCAGCG GCTGGATCGT GTTCGAGGGC CCGGAGCCGG GTGCGCCCGT GCAGCCCGCG
GGGGAAGTGC TCAGGGTGTT CACGCCCGGT AGCCAGGTGG TGATCAACGG GGACAACGTG
ACCAGCGCCT ACATCTCCTA TGTGGCGACC GGGGAGACCC GGCGAATGAA CAATGCGCTG
CTCATGGGGT CCGTGACCGT CTGTGCCGGA AACCAGGCCC GGCGCATCGT AATCAGCCGC
ACCGGCCGCC CCCGGGTGGA GCAGACCAGC TGCTGA
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| Protein sequence | MPREHGLTLI ELMVTLAVAA ILITVAVPGF GSLVAEQRLV TTTNQFVTAL HLTRSEAVKR
GARVTLCASE DGSSCGSSNG YSSGWIVFEG PEPGAPVQPA GEVLRVFTPG SQVVINGDNV
TSAYISYVAT GETRRMNNAL LMGSVTVCAG NQARRIVISR TGRPRVEQTS C
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