| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3185 |
|---|
| Symbol | |
|---|
| ID | 7315557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 3337084 |
|---|
| End bp | 3339252 |
|---|
| Gene Length | 2169 bp |
|---|
| Protein Length | 722 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643618084 |
|---|
| Product | GTP diphosphokinase |
|---|
| Protein accession | YP_002515241 |
|---|
| Protein GI | 220936342 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGAAA CCGTTACAAC CGTCCCCACC ACAGGGATCG CATCCAAGGA CAACACGCGA
TTCCTGGCCA GTGACCTGTG CGCGTACCTG GACAGCTACC TGGAGCCGCA GCAGGTCAGT
GAGGTCTACA AGGCCTACCT GTTCGGCGCC GAGGCCCACG AGGGCCAGAC CCGCCTCTCC
GGCGAGCCCT ACATCTACCA TCCGCTGGCC GTGGCCAAGA CCATGGCCGA GATGCGGATG
GACCACAAGT CCATCATCGC CGCCATCCTC CATGACGTCA TGGAGGACAC CCACATCAGC
AAGGAGCGCA TCGTCACCGA GTTCGGCGAG GACGTGGCCG AGCTGGTGGA TGGGGTCTCC
AAGCTCACCC ACCTGAAGTT CCGCTCCAAG GCCGAGGCCC AGGCGGAGAA CTTCCGCAAG
ATGATGCTGG CCATCACCAA GGATCTGCGC GTGATCCTGG TGAAGCTGGC CGACCGCCTG
CACAACATGC GCACCCTGGG CGTCATGCGC CCGGACAAGC GCCGGCGCAT CGCCCGCGAG
ACCCTGGAGA TCTACGCCCC CATCGCCCAG CGCCTGGGCA TGAACGCCAT CCGCCGTGAA
CTGGAACAGC TGGGCTTCGA GGCCATGTAC CCGAACCGGT ACAAGGTGCT GCAGGACGCG
GTCAGCCGGG CCCGGGGCAA TCGCAAGGAG GTGATGCAGA AGATCGAGGC GGCCATCTGC
AATCGCATGG AGGACGCGCA CATCGAGGCG CGCATCATCG GTCGGGAGAA GAACCTCTAC
AGCATCTACC GCAAGATGAA GCAGAAGCGC CTGCCGTTCA ACGAGGTGTT CGACGTGTTC
GCGGTGCGCA TCGCGGTGGC CGACGTGGAT ACCTGCTACC GGGCCCTGGG CGTGGTGCAC
AACCTCTACA AACCGGTGCC CGGGCGCTTC AAGGACTACA TCGCCATCCC CAAGGCCAAC
GGCTACCAGT CCCTGCACAC GGTGCTGTTC GGTCCCCACG GCATCCCCAT CGAGATCCAG
ATTCGCACCG AGGAGATGGA CCAGGTGGCC GAGAGCGGCA TCGCGGCCCA CTGGCTGTAC
AAGGCAGGCG ACCGGCATTC CGCCAGCGCC CAGGCCCGCG CCCGGGAGTG GCTCAAGGGG
GTGCTGGAGA TCCAGCAGAG CGCCGGCAAC TCCATCGAGT TCCTGGAAAA CGTCAAGGTG
GATCTCTTCC CCGAAGAGGT CTACATCTTC ACCCCCAAGG GCGAGATCAT GGAGCTGCCC
AAGGGGGCGA CCGCCGTGGA CTTCGCCTAC GCGGTGCACT CCGACGTGGG TAACACCTGC
GTGGCGGTGA AGATCGACCG GCGCCTGGCG CCCCTGTCCA CCCAGCTGTT CAGCGGTCAG
ACCGTGGAGA TCATCACCGC CCCCGGCGCC CGGCCCAACC CTGCCTGGCT GTCCTTCGTG
GTCACCGGCA AGGCACGCAC CAGTATTCGC CATTATCTCA AGAACCTGCA GGAAGACGAG
GCCGCCAACC TGGGCCGTCG CCTGCTGGAC AAGGCGCTTG CCGGTTACAG CCTGTCCCTT
GACCAGGTGG CGCCCGAGCG AGTGGAGACC CTGCTGGCAG ACCTGCAGCT CAAGGACCTC
AATGCCCTGC TGGCAGACAT CGGCCTGGGC AACCGCATGG CCGCCCTGGT GGCGCGGCGC
CTGGGCGGTG CCGAGGAGGA GCCGGCGGAG CAGGCCGCCC CGGACCGTCC CCTGGCGGTC
AAGGGCACCG AGGGCATGGT GTTGTCGTTT GCCCGCTGCT GCTATCCGAT CCCCGGCGAT
CCCATCGTCG GCGTGATGAG CGCCGGCCGC GGCCTGGTGG TGCACCGGGA GGGATGCCGT
AACGTGGCCG AGTACCGGGA CAAACCGGAC AAGTGGATCC CCGTGGAATG GTCCCCGGAG
CCGGGGCTGG AATATCCCGC CGCCATCCGC GTGCAGACCG CCAACCAGCG CGGCGTGCTG
GCGAGCCTCG CCGCGGTGAT CGCCGACATG GGCTCGAACA TCGAGAACGT CTCCTTCGAC
GAGCGCGATG GCTCCTCCAC CACCATCACC TTCACCCTCT CCACCCAGGG TCGCCGTCAC
CTGGCCGGCA TGATGCGCCG CATCCGGCGC CTGCCCCAGG TGATGAAGAT CCAGCGCGCG
CGTGGTTGA
|
|---|
| Protein sequence | MVETVTTVPT TGIASKDNTR FLASDLCAYL DSYLEPQQVS EVYKAYLFGA EAHEGQTRLS
GEPYIYHPLA VAKTMAEMRM DHKSIIAAIL HDVMEDTHIS KERIVTEFGE DVAELVDGVS
KLTHLKFRSK AEAQAENFRK MMLAITKDLR VILVKLADRL HNMRTLGVMR PDKRRRIARE
TLEIYAPIAQ RLGMNAIRRE LEQLGFEAMY PNRYKVLQDA VSRARGNRKE VMQKIEAAIC
NRMEDAHIEA RIIGREKNLY SIYRKMKQKR LPFNEVFDVF AVRIAVADVD TCYRALGVVH
NLYKPVPGRF KDYIAIPKAN GYQSLHTVLF GPHGIPIEIQ IRTEEMDQVA ESGIAAHWLY
KAGDRHSASA QARAREWLKG VLEIQQSAGN SIEFLENVKV DLFPEEVYIF TPKGEIMELP
KGATAVDFAY AVHSDVGNTC VAVKIDRRLA PLSTQLFSGQ TVEIITAPGA RPNPAWLSFV
VTGKARTSIR HYLKNLQEDE AANLGRRLLD KALAGYSLSL DQVAPERVET LLADLQLKDL
NALLADIGLG NRMAALVARR LGGAEEEPAE QAAPDRPLAV KGTEGMVLSF ARCCYPIPGD
PIVGVMSAGR GLVVHREGCR NVAEYRDKPD KWIPVEWSPE PGLEYPAAIR VQTANQRGVL
ASLAAVIADM GSNIENVSFD ERDGSSTTIT FTLSTQGRRH LAGMMRRIRR LPQVMKIQRA
RG
|
|---|
| |