Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3148 |
Symbol | |
ID | 7317378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3295688 |
End bp | 3297505 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643618047 |
Product | GTP-binding protein TypA |
Protein accession | YP_002515204 |
Protein GI | 220936305 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.284484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGACA AGCTTCGCAA TATCGCCATC ATCGCCCACG TTGACCACGG CAAGACCACC CTGGTGGACA AGCTGCTGCA GCAGTCCGGT ACCTTCGGTG AACGGGCCCA CATCACCGAA CGCATGATGG ACTCCAACGC GCTGGAGCAG GAACGCGGTA TCACCATCCT GGCGAAGAAC ACGGCCCTGA CCTGGAACGG CTACCGCATC AACATCGTGG ATACCCCCGG GCACGCCGAC TTCGGCGGCG AGGTGGAGCG GGTGCTGTCC ATGGTGGACT CGGTGCTGCT GCTGGTGGAC GCGGTGGACG GGCCCATGCC CCAGACCCGC TTCGTGACCT CCAAGGCCTT CGCCATGGGC TTCAAGCCCA TCGTGGTGGT GAACAAGATC GACCGCCCCG GCGCCCGGCC GGACTGGGTG GTGGACCAGA TCTTCGACCT GTTCGACCGC CTGGGCGCCA CCGAGGAGCA GCTGGATTTC CCGGTAGTCT ACTGCTCGGC CCTGAAGGGC TTTGCCGGGC TGACCAAGGA CGTGACCGAG GGCGACATGA CGCCCCTGTT CCAGACCATC ATCGACAAGG TGAGCCCGCC GGCCGTGGAC GCCGAGGGCC CGTTCCAGAT GCAGGTCTCC TCGCTGGACT ACAACAGCTT CCAGGGCCTC ATCGGCATCG GCCGCATCAC CCGCGGCAAG GTCAAGACCA ACAGCGCCGT GAAGGCCATC GACCGGGAAG GCAATGTGCG CTCCGGCCGC ATCCTGCAGA TCCTGGGCTT CAAGGGCCTG GAGCGCGTCG AGGTGCCCGA GGCCCGCGCC GGCGACATCA TCGCCTTCAC CGGCATGGAT GAACTGTACA TCTCCGACAC CCTGTGTGAC CCGGCTGCGG TCGAGGCGCT CAAGGCGCTG ACCGTGGACG AGCCCACGGT GAGCATGACC TTCCAGGTCA ACACCTCGCC CTTCGCCGGC AAGGAAGGCA AGTTCGTCAC CTCCCGCAAC ATCCGCGACC GGCTGTTCGA GGAGCTCAAG CACAACGTGG CCCTGCGCGT GGAGGAGACC GAAGATCCGG ACAAGTTCCG CGTCTCCGGT CGCGGCGAGC TGCACCTGTC CATCCTGATC GAGAACATGC GCCGCGAGGG CTTCGAGCTG GGCGTGTCGC GCCCCGAGGT GATCGTGCGC GAGCGTGACG GGGTCCGGGA AGAGCCCTAC GAGATGGTGA CCGTGGACGT GGAGGAGCAG CACCAGGGCG CCATCATGGA GAAGCTGGGC GGGCGCCGCG GTGAACTGCT GGACATGATC CCCGACGGCA AGGGCCGGGT GCGCCTGGAC TACAAGGTGC CCTCCCGCGG CCTGATCGGC TTCCAGACCG AGTTCCTCAC CGCCACCTCC GGCACCGGCA TCCTGCACCA CGTGTTCGAC AGCTACGGCC CCTACCGACC CGGCTCCGTG GGCGCTCGCA ACAACGGCGT GCTGATCGCC AACGGCGCCG GCAAGGCCCT GGGCTACGCC CTGTTCAACC TGCAGGAGCG CGGCCGCCTG TTCATCGGCC ATGGCGATGA GGTCTACGAG GGCATGGTGA TCGGCCTGCA CAGCCGCGAC AACGACCTGG TGGTCAACCC GCTCAAGGCC AAGCAGCTGA CCAACATCCG CGCCGCCGGC TCCGACGAGA ACATCATCCT CACCCCGCCC ATCCGCATGA CCCTGGAGCA GGCCCTGGAG TTCATCGAGG ACGACGAACT GGTGGAAGTC ACGCCCAAGT CCATCCGGGT GCGCAAGAAG CTGCTGCTGG AACACGAGCG CAAGCGGGCC TCGCGCGCGG CGAGCTGA
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Protein sequence | MTDKLRNIAI IAHVDHGKTT LVDKLLQQSG TFGERAHITE RMMDSNALEQ ERGITILAKN TALTWNGYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTSKAFAMG FKPIVVVNKI DRPGARPDWV VDQIFDLFDR LGATEEQLDF PVVYCSALKG FAGLTKDVTE GDMTPLFQTI IDKVSPPAVD AEGPFQMQVS SLDYNSFQGL IGIGRITRGK VKTNSAVKAI DREGNVRSGR ILQILGFKGL ERVEVPEARA GDIIAFTGMD ELYISDTLCD PAAVEALKAL TVDEPTVSMT FQVNTSPFAG KEGKFVTSRN IRDRLFEELK HNVALRVEET EDPDKFRVSG RGELHLSILI ENMRREGFEL GVSRPEVIVR ERDGVREEPY EMVTVDVEEQ HQGAIMEKLG GRRGELLDMI PDGKGRVRLD YKVPSRGLIG FQTEFLTATS GTGILHHVFD SYGPYRPGSV GARNNGVLIA NGAGKALGYA LFNLQERGRL FIGHGDEVYE GMVIGLHSRD NDLVVNPLKA KQLTNIRAAG SDENIILTPP IRMTLEQALE FIEDDELVEV TPKSIRVRKK LLLEHERKRA SRAAS
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