| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3143 |
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| Symbol | |
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| ID | 7317373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3290627 |
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| End bp | 3292987 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643618042 |
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| Product | signal transduction protein containing a membrane domain an EAL and a GGDEF domain |
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| Protein accession | YP_002515199 |
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| Protein GI | 220936300 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.661256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCCC ACATGTTCCG GCGGACGGCA CTCACCCTGA AGATGCTGAT TCTGACCGCC
GCCCTCGGGG TGGCGGTCTG GCTGGTCTCG GACAGCCACC ACACCCGTTC CCTGAAGGAG
CTGTTCCACG AAAGGCTGGC TGAACGCTTC AGCCTGGAGG CCCAGGAACA CCGCACGCGC
TTCGACCGCC ATGTGCGCAT CCACACCCAG GCGGCAAAGA TGCTGGCGGG CTCGCAGATG
ATGCTCGATT ACCTCCACGG CGAGCCCTGG GAGGGGCGGG ATGCACAATC CGTGCAGTAC
CACGTCGATC CGCCCGGCTG GATGCCGGCG CACTCCGTGC TGCGTCCGTT CGTGGTGCCG
CGCTACGCCC TGTTACTGGA TTCGGAGGGT CGGGTCCGGG AGCTGTATCA CTGGGACCAG
ACTGTGCCCT CTCCCGACCT GCTCACGCCC TCCGCCCTGG TGCTGGCCCT GTCGCGGGGG
CAGAGCTACC TGACGCGGCT CGAGGCGGGC CCCTACCTGC TGAGCTCCGA GCCGGTGATG
CTGGGCGGCG AACTGGTGGC CATACTGATG CTGGCAGCGC CTATCGACAG CGGATTCCTG
CGTGAATCCC AGGCGCTGGC AACGACACCC CATACGGTCG CGCTGCTGTC CGAGGGCGCC
GACAGGATCC TGGTGAGCAG CGACCCGAAC GCGGTGCCCG ATGGCATCCG CCTGTCGGAG
TTGAGCGATC TCTATCTGAC CGTGGGCAAG GGATTCTTCG ATTACGGCTC ATCCGACCTG
GTGATCCGGT TTGCCTCCTT CATCCCGCTG CAGGAGGTTT CGGACCTGAC CCAGGCGGCG
CTCGACCGCG CCCGTGAGCA GCGCATCATG ATCACCGCCG CGTTCGGTGT GACCTTCATG
CTGCTCATCT ACCTGCTGAC CCGCCGGGTG CGTGCCCTGA CCCAACGGGT GGTGGAGTTT
TCCAGTCACA TGGCGGTCAA GCAGGACCGC ACCGACAGCC GGGATGAACT GGATATACTG
GAGGATCGCT TCAAGACCCT GACCAGCGCC ATCATGCGCG AAACCGAGGC CCTGGAGTAC
CAGGCCTCTC ACGATCCCCT GACCGACCTG CCCAATCGCA AACTGCTCAA TGACCGACTG
CAGAACGAGC TGCTGCGCAG CGGTTTCACC GGGGCGCCGC TGGTGCTCAT GGTCAGCGAC
CTGGATCACT TCAAGGAGAT CAACGACACC CTGGGCCACC ACGTGGGTGA CCTGGTCCTG
CAGCAGGCGG CGGAACGCCT CTACAAGACC GTGCGCAAGG CGGACACGGT GGCCCGTCTG
GGCGGGGACG AGTTCAGCAT GCTGTTCCCG GATACCACCC TCGAGCAGGG GCTCAAGATC
GCGCGCCAGA TCGGCCGTGT CTTCGAGTCA CCGTTCGCGG TGGAGGGCCA CAACCTGAAC
GTGGGCATCA GCATCGGCAT CGCCGAGTTT CCCGCCCATG GAGATGACGT CAACATCCTG
ATGCAACGAG CCGATGTGGC CATGTACGCG GCGAAGCAGA ACGGCCTGAC CTATGCCGTC
TATGACCCGG GCAAGGACAC CCACCATGTC AGCCGCCTGG AACTGCTCTC CGACCTGCGC
AGGGCCATCG AGACAGGCAG TCTGGAATGC CACTACCAGT GCAAGCTGGA CATCGAATCT
GGCAGGGTGA CGGGCGCGGA GGCGCTGCTG CGCTGGGATC ACCCTGACCG TGGCATGATC
CACCCGGACG AGTTGATCCC CCTGGCGGAA AAGACCGGAC TGATACGCCC GCTGACAAAC
CTGGTGCTGA GAAAGGCGCT CCAGGAATGC GCCCGCTGGC GGGAGAGCGG CCTCGATCTG
AGCGTGGCGG TCAATCTCTC GGCCCAGTGC CTGCGGGAGG ATTCGCTGCT GGACACACTG
CGCCGATGCC TCGACGAGTT CCGCCTGCCG GCATCGGCCT GTGTGCTGGA GCTCACCGAG
AGTGACATGA TGGCGGACCC CCTGCGTGCC AAGGAGATCC TCATGGAACT GGATGTCATC
GGGGTGCGGA TCTCCGTGGA CGATTTCGGT ACAGGCTATT CCTCGCTCGC TTACCTGAAG
CAGCTGCCCA TCAGCGAGAT CAAGGTTGAT CGCTCTTTTG TCAGGGAGAT GCTCGAGGAT
GAGAACGACC TGGTGATCGT GCGTGCCATC GTTGACCTGG CCCACAACCT GGGCATCCGT
GTCGTGGCCG AGGGAGTGCA CTCCAGGGAG GTCCTGGACA TGCTGGCGAG ACTCAAGTGC
AACGAGGCCC AGGGTTACTT CATCAGGAAG CCGGTTCCGG GTGACGAGTT GCTCACATGG
CTGCAGTCGG AGGCGCGGTG A
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| Protein sequence | MSAHMFRRTA LTLKMLILTA ALGVAVWLVS DSHHTRSLKE LFHERLAERF SLEAQEHRTR
FDRHVRIHTQ AAKMLAGSQM MLDYLHGEPW EGRDAQSVQY HVDPPGWMPA HSVLRPFVVP
RYALLLDSEG RVRELYHWDQ TVPSPDLLTP SALVLALSRG QSYLTRLEAG PYLLSSEPVM
LGGELVAILM LAAPIDSGFL RESQALATTP HTVALLSEGA DRILVSSDPN AVPDGIRLSE
LSDLYLTVGK GFFDYGSSDL VIRFASFIPL QEVSDLTQAA LDRAREQRIM ITAAFGVTFM
LLIYLLTRRV RALTQRVVEF SSHMAVKQDR TDSRDELDIL EDRFKTLTSA IMRETEALEY
QASHDPLTDL PNRKLLNDRL QNELLRSGFT GAPLVLMVSD LDHFKEINDT LGHHVGDLVL
QQAAERLYKT VRKADTVARL GGDEFSMLFP DTTLEQGLKI ARQIGRVFES PFAVEGHNLN
VGISIGIAEF PAHGDDVNIL MQRADVAMYA AKQNGLTYAV YDPGKDTHHV SRLELLSDLR
RAIETGSLEC HYQCKLDIES GRVTGAEALL RWDHPDRGMI HPDELIPLAE KTGLIRPLTN
LVLRKALQEC ARWRESGLDL SVAVNLSAQC LREDSLLDTL RRCLDEFRLP ASACVLELTE
SDMMADPLRA KEILMELDVI GVRISVDDFG TGYSSLAYLK QLPISEIKVD RSFVREMLED
ENDLVIVRAI VDLAHNLGIR VVAEGVHSRE VLDMLARLKC NEAQGYFIRK PVPGDELLTW
LQSEAR
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