| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3131 |
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| Symbol | |
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| ID | 7317361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 3281877 |
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| End bp | 3283778 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643618030 |
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| Product | cyclic nucleotide-binding domain (cNMP-BD) protein |
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| Protein accession | YP_002515187 |
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| Protein GI | 220936288 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCAG AAGTCAGGGA AATACGTGAA CACATGGGGC GGTTTCCGCC TTTCGACACC
CTGAGTGATG AGCTGCTGGA CGAAGTGGCC GCCTCGGTGG AGATCGCCTA TCACAAGGCG
GGGTCGAGCA TCTTCGCCCA TGGCGATGCC ATCCATGCCT TGCCCTACAT CCGCAGTGGC
GCGGTGGAGG TCTACCGGCA CAGCGGCGAA CTGTACAACC GTCTCGGCGA GGGGGACATC
TTCGGCCAGT TCGGTCTGCT GCGTAACCGG CGGGTGCGCT TCCCGGTCAA GGCCATCGAA
GATACCTTGC TCTACCTGAT CCCGGAGGCG GTGTTCGATC GCCTCTGCAA CGAGGACGAT
CAATTTGCCG ATTTCGTAGA GCTTTCCGGG TCTCGGCTGC AGAGCACCGT GGAGCAGACG
GCACGCAGCA ATGACCTGAT GGTGACACGG GTGCGCCGTC TGATCTCACG CCTGCCGGTG
ATGATCCATG AGTCCGCCAC CGTCCAGGAG GCGGCACGTC TGATGACAGA GCAGGATGTT
TCGTCCGTGC TGCTCATCGC ACCCGCGATT AGTGATGATT CAGAACGGGT GTTCGCCGAT
GCGGAAGGAC GTCACTGGCA GTTGGCCGGC ATGGTGACCG ACAAGGATCT GAGGGAACGC
ATCGTCGCCC GGGGTGCGCC GCCGGATACG CCGCTCAGCG CCATCAGCCA CGGGCAGCTG
ATCACCATCC AATCCGACGA GTCGGTCTAC GAGGCCATGC TCGCCATGTT GCGCAACAAC
ATCCAGCGAC TGCCCGTATT GCACCGGCGG CGCCCCGTGG GCGTGGTGCA CCTGGCGGAC
ATCGTGCGTT ACGAGACCAA CAGCAGCGCC TACCTGGTCA GCAATATTTT CAATCGGACC
TCGGTGAAGG GGCTGGCGCG CCTGGTGCCG GATATCCGCG CTGCGTTCGT GCGCCTGGTG
GACGAGGGCG CCACATCACA GATGATCGGC AACGCCATGT CCACCATCGG GCGCAGCCTG
ATGCGCCGCC TGGTGGAGTT GGCCGAGGAA GAGCTGGGTC CGCCACCGGT GCCCTACTGT
TTCATGGTGC ACGGCTCTCT GGCACGCAAT GACCAGTCGG TCACCACGGA CCAGGACAAT
GCCCTGGTGC TGCATGACGA CTTCGACCCG AAGCGCCATG ACGGTTACTT CAAGGCCCTG
GCGCAAAGGG TCAGCGACGG GCTGGATGCC TGCGCTTACC CCTATTGCAA GGGCGGCATC
ATGGCTACAA ATGACCCCTG GCGTCAGCCC CTGTCGCAGT GGAAGCGCTA CTTCGAGGAA
TGGATCGCGC AACCCGATCC GCAGCGGTTG CTGCACAGCT CCATCTTCTT TGATCTGGAT
GCCGTGTACG GCGAGGAGCG CTTCGTGGAG GTCCTGCAGG AGCTGATCTC GACCCGGGCC
CGGCAGAGCC CGAAGTTCCT TGCCGCCCTG GCGCGCAACG CCTTGAGCCG CACGCCGCCA
CTGGGCCTGT TCCGTACCTT CGTGCTGGAG CAGGACGGCA AACAGAACAA CACCATCAAC
ATCAAACGTC GCGGTGTGGC GCCCATGAAC GATGTGATCC GGGTCCATGC CCTGGCCGCC
GGCTCACGCA GGCAGAATGC CTTCGAACGA CTGGATGATA TCGATCAGGC CGGCCTGTTG
CCCGCGGGAC AAACGGACAA GCTGCGCTAT GCCCTGGAGT TCATGTCCAT CATGCGTCTG
CGACACCAGG CCTATGAGGT CAAGCACGAC CAGCCTGCCG ACAACGCCAT CGATCCTGAG
CGGGTATCTC CCCTGGAGCG GCACAATCTG AAGGAGGCCT TCCAGGTGCT GAGCAATGCT
CAGAAGTTCC TGCGCTTTCG TTACCCCAGC CCGACCCGCT GA
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| Protein sequence | MEAEVREIRE HMGRFPPFDT LSDELLDEVA ASVEIAYHKA GSSIFAHGDA IHALPYIRSG
AVEVYRHSGE LYNRLGEGDI FGQFGLLRNR RVRFPVKAIE DTLLYLIPEA VFDRLCNEDD
QFADFVELSG SRLQSTVEQT ARSNDLMVTR VRRLISRLPV MIHESATVQE AARLMTEQDV
SSVLLIAPAI SDDSERVFAD AEGRHWQLAG MVTDKDLRER IVARGAPPDT PLSAISHGQL
ITIQSDESVY EAMLAMLRNN IQRLPVLHRR RPVGVVHLAD IVRYETNSSA YLVSNIFNRT
SVKGLARLVP DIRAAFVRLV DEGATSQMIG NAMSTIGRSL MRRLVELAEE ELGPPPVPYC
FMVHGSLARN DQSVTTDQDN ALVLHDDFDP KRHDGYFKAL AQRVSDGLDA CAYPYCKGGI
MATNDPWRQP LSQWKRYFEE WIAQPDPQRL LHSSIFFDLD AVYGEERFVE VLQELISTRA
RQSPKFLAAL ARNALSRTPP LGLFRTFVLE QDGKQNNTIN IKRRGVAPMN DVIRVHALAA
GSRRQNAFER LDDIDQAGLL PAGQTDKLRY ALEFMSIMRL RHQAYEVKHD QPADNAIDPE
RVSPLERHNL KEAFQVLSNA QKFLRFRYPS PTR
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