| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_3091 |
|---|
| Symbol | |
|---|
| ID | 7316021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 3239978 |
|---|
| End bp | 3240799 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643617990 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_002515147 |
|---|
| Protein GI | 220936248 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553
[COG3245] Cytochrome c5 |
|---|
| TIGRFAM ID | [TIGR01195] sodium pump decarboxylases, gamma subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.994793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAACC CACAACAGAA GACTGACTTC ACGACCAAAT TCGTTCTGGC CATCAGCGTC
GTGGTACTGC TGGTGACCGT GATCTTCCTG GTGACCCGCC TGATCAATGT GATCGATCAG
GCACGTGCCC CGGCCGAACC GAGCACCTCC GCCCAGGCCA TGGTGGAGGA GCGCATCCGG
CCCATCGGCC GCGTGGTCTC CGCCGATGTG GACGCCCAGG CCGTTGCCGC GCCCCGCACC
GCCGCCGACA TCTACCGCGG CGTCTGCGCT GCCTGCCACG ACACCGGCGC CGCCGGTGCC
CCCCGCAAGG GCGACGAGGC CGAATGGCGC ACGCGCATGG GCCAGGGCTT CGACACCGTC
CTGAGCCATG CCATCAACGG CTTCAACGCC ATGCCCGCCC GGGGCGGCGA TCCCAGCCTG
AGCGATGACG ACATGCGCCA GGTGGTGGCC TACCTGCTGA CTGAATCCGG CATCCGCGTG
AACGGCGCCG CTGCCAGCGC ACCCGCGGCT GCGCCTGCTG CTGCTCCGGC TGCGGCTGCT
CCTGCTCCTG CGGCCGCCCC TACCGCCACC GCCGCAGCCG GCGACGCCAC TGCCGGTCAG
GCCAAGTTCG CCAGCTGCGC CGCCTGTCAC GGCGCCCAGG GCCAGGGCAT GGGCATCTTC
CCCAAGCTGG CCGGCACCGC CCCCGAGCGC ATCGCCGAAC TGCTGAAGAA GTACCGCGCC
GGCGAGCAGG TCGGTCCCCA GACCGCCCTG ATGGCCCCCA ACGCCACCGG CCTGTCCGAC
CAGGACATCG CCGACCTGGC CGCCTTTGTC GGCACCCTGT AA
|
|---|
| Protein sequence | MANPQQKTDF TTKFVLAISV VVLLVTVIFL VTRLINVIDQ ARAPAEPSTS AQAMVEERIR
PIGRVVSADV DAQAVAAPRT AADIYRGVCA ACHDTGAAGA PRKGDEAEWR TRMGQGFDTV
LSHAINGFNA MPARGGDPSL SDDDMRQVVA YLLTESGIRV NGAAASAPAA APAAAPAAAA
PAPAAAPTAT AAAGDATAGQ AKFASCAACH GAQGQGMGIF PKLAGTAPER IAELLKKYRA
GEQVGPQTAL MAPNATGLSD QDIADLAAFV GTL
|
|---|
| |