Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_3090 |
Symbol | |
ID | 7316020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3238052 |
End bp | 3239896 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643617989 |
Product | allophanate hydrolase |
Protein accession | YP_002515146 |
Protein GI | 220936247 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCACC CGCATCTGAG CCTGGACATC GACAGCCTGC ACCGCGCCTA CCGGGAGGGC CGGCTGACAC CCGCCGAGCT GATCGACGAG GTGCTCGCGC GCATCGCCGC GCAACCGGAT CGCCACGAAT GGATCCGGGT GCTGGACCGG GACGCCCTCA TGGCCCACGC CGCACGCCTG GAAGGCGAGA GTCCCGACAC CCTGCCCCTG TACGGCATCC CCTTCGCCAT CAAGGACAAC ATCGATCTCG CCGGCGTGCC CACCACCGCC GCCTGCCCGG CCTTCGCCTA TACGCCAGAG CACAGCGCCT TCGTGGTCGA GCGCCTGATC GAGGCCGGCG CCCTGCCCAT CGGCAAGACC AACCTGGACC AGTTCGCCAC CGGCCTGGTG GGCACCCGGT CACCCTATGG CGCCTGCGCC AACGCCTTCG ACCCGGCCTA CATCTCCGGC GGATCCAGCG CCGGCTCGGC GGTCACCGTG GCCACCGGGG TGGTGAGCTT TTCCCTGGGC ACCGACACCG CGGGCTCCGG CCGGGTACCG GCGGCCTTCA ACAACCTGAT CGGCGTGAAG CCCACCCGGG GCCTGCTGTC CGCCTCGGGC GTGGTGCCCG CCTGCCGCAG CCTGGACACC GTGTCCATCT TCGCCCTCAC GGTGCCCGAC GCCGAGCGCG TACTGGCGGT GACCGCCGCC TTCGATGCGC ACGACGCCTA TGCACGGCCC CGGCCGCTCA CCACCCACGG CTTCGATCCC GCCCGGTTCC GCTTCGGCGT GCCCCGGGCG GAACAGCTGC AATTCTTCGG CAACGCCGAG GCCGAGCGCC TGTTCCACGA GGCGGTGGCG CGCCTTCAAT CCCTGGGCGG GACGCGGGTG GAGATCGACT TCGCCCCCTT CCTGGACGCC GCGCGCCTGC TCTACGAGGG CCCCTGGGTC ACCGAACGCT ACCTGGCCAC CCAGCCCCTG ATCGACGAGG CACCCGGTGA ACTGCTGGCC GTGACCCGGG GCATCATCGG CGGCGGCGCC GCGCCCAGGG CCACGGACTG CTTCCGCGCC CAGTACCGGC TCATGGACTA CAAACGCCAG GCCGAGGCCG CCTGGCAGGC GGTGGACGTG CTGGTCACCC CCACCGCCGG GACGATCTAC ACCATCGCGC AGGTGAACGC CGACCCGGTG CGGCTCAACT CAAATCTTGG CTACTACACC AACTTCATGA ACCTGCTGGA CCTGGCGTCG CTCGCGGTAC CCGCCGGTTT CCAGGCCGAC GGCCTGCCCT TCGGCATCAC CCTGATCGCC CCGGCCTTCG GCGACGGCGC CCTGCTGCCC CTGGGCGAGC GCTTCCAGCA CGCCTCGGTT GAAACCCAGG GCGCCACGGC GCACCCGGTG CCGGCGCCCC GTCCGGTGAC CGGCCCCGCC CCCGGCCACC TCCGCGTGGC GGTCTGCGGT GCCCACATGC AGGGGCTGCC GCTCAATCAC CAGCTCACCG AGCGCGGCGC CCGGCTGGTG GCAAAGACCC GCACCAGCCC CCACTACCGC TTCTACGCCC TGGCCGGCGG CCCGCCCTGG CGCCCCGGAC TGGTGCGCGA TGCCGGCGGG CAGGCCATCG AGGTGGAGGT CTGGGAACTG CCCGCGGCCC ACTTCGGCAG CTTCGTGGAC GGCATCCCCG CGCCGCTTGG CATCGGCCGG GTGGAACTGG CCGATGGCAG CCGTGTGGCC GGCTTCCTGT GCGAGCCCCA CGGAGTGGCC GACGCCCGGG AGATCACCCA CCTGGGCGGC TGGCGCGCCT ACCTAGGAGC CTGTCGGACC GAATTGATCA CAGACAGTGC ACGCGCCGGT GCGGATGGCC TATAA
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Protein sequence | MKHPHLSLDI DSLHRAYREG RLTPAELIDE VLARIAAQPD RHEWIRVLDR DALMAHAARL EGESPDTLPL YGIPFAIKDN IDLAGVPTTA ACPAFAYTPE HSAFVVERLI EAGALPIGKT NLDQFATGLV GTRSPYGACA NAFDPAYISG GSSAGSAVTV ATGVVSFSLG TDTAGSGRVP AAFNNLIGVK PTRGLLSASG VVPACRSLDT VSIFALTVPD AERVLAVTAA FDAHDAYARP RPLTTHGFDP ARFRFGVPRA EQLQFFGNAE AERLFHEAVA RLQSLGGTRV EIDFAPFLDA ARLLYEGPWV TERYLATQPL IDEAPGELLA VTRGIIGGGA APRATDCFRA QYRLMDYKRQ AEAAWQAVDV LVTPTAGTIY TIAQVNADPV RLNSNLGYYT NFMNLLDLAS LAVPAGFQAD GLPFGITLIA PAFGDGALLP LGERFQHASV ETQGATAHPV PAPRPVTGPA PGHLRVAVCG AHMQGLPLNH QLTERGARLV AKTRTSPHYR FYALAGGPPW RPGLVRDAGG QAIEVEVWEL PAAHFGSFVD GIPAPLGIGR VELADGSRVA GFLCEPHGVA DAREITHLGG WRAYLGACRT ELITDSARAG ADGL
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