Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2919 |
Symbol | |
ID | 7317024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 3063522 |
End bp | 3064232 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643617819 |
Product | alanine racemase domain protein |
Protein accession | YP_002514979 |
Protein GI | 220936080 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.489919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCA TTGGCGACAG ACTCGACACC GTCAGGACCC GTATCCATGA GGCCGCCCTG CGTCATGGAC GCGACCCCGC CACGATCACC CTGCTGGCGG TGAGCAAGAC CCAGCCCGCC GAGGCATTGA GGGAGGTCAT GGCCTGCGGT CAGCGGGCCT TCGGCGAGAA CTACGTCCAG GAACTGGCCG ACAAGGCCGA TGCCCTCGCG GATCTGCGTC CCGAGTGGCA TTTCATCGGC CCGCTGCAGT CCAACAAGAC CCGCCTGATT GCCGGCCTCG CCCACTGGGT GCACAGCATC GAGCGGGACA AGATCGCCCG GCGCCTGTCG GAACAGCGCC CCGGGGAGGC CGTCGACCTG CAGGTCTGCC TGCAGGTGAA CCTGGACGCG GAGGCGAGCA AGTCCGGGCT TGCCCCCGAG GCCCTGCCGG CCCTGGCCGA AGTAGTGGCG GGACTTCCCC GGCTGCGCCT GCGCGGCCTG ATGGCCATCC CCGCCCCCAG CGAGGACTTC GCCACCCAGC GACGCGCCTT TGCCCGCCTG CGCGAGATGC AGGAAGACCT GATCCGCCGG GGCCATCAGC TGGATACCCT GTCCATGGGC ATGAGCGGCG ACCTGGAGGC GGCCATCGCG GAAGGCGCCA CCATCGTGCG CGTGGGCACC GCCATCTTCG GCAGCCGCCG GGTGGCAGGC CGCGGCGGGC AGGGTTTATG A
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Protein sequence | MSTIGDRLDT VRTRIHEAAL RHGRDPATIT LLAVSKTQPA EALREVMACG QRAFGENYVQ ELADKADALA DLRPEWHFIG PLQSNKTRLI AGLAHWVHSI ERDKIARRLS EQRPGEAVDL QVCLQVNLDA EASKSGLAPE ALPALAEVVA GLPRLRLRGL MAIPAPSEDF ATQRRAFARL REMQEDLIRR GHQLDTLSMG MSGDLEAAIA EGATIVRVGT AIFGSRRVAG RGGQGL
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