Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2875 |
Symbol | |
ID | 7315312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 3013959 |
End bp | 3015227 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643617775 |
Product | phage integrase family protein |
Protein accession | YP_002514935 |
Protein GI | 220936036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.698524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGA ACCTGCTCTC GGCCAGGAAG GTCGAGACCA TTCCTTCCCA AAAAGAACCG TACTGGCTCA AGGACGGGGG TAGTCTATTT CTGTACGTCA CGCCCAGCGG AAGCAAGTTG TGGCGCTACC GCTATCGGCT TGGCGGAAAG CCTGCCATCT ACGCGATCGG CAAGTACCCC CAGGTCTCAC TGGAGGCGGC GCGGACCGAG CGGGATCGCG CGCGGGAACT CGTCAAGAAG GGCGTACACC CCGTGGTGGA GAAGAGAGTC AACATCTCCA CTCAGCTTGA AAAGAACGAG AACACCTTTG AGCCAGTGGC TCGCAGATGG ATGGCGAGCA ACGTGCAGTG GAGCGAGGGT TACGCCGATC AAGTCAAGCG CACTTTGGAG AACGATGTTT TTCCCAAAGT GGGCAAGCTG CCGGTCAGCT CAATCCGGAC TGCTCACCTG CGCCCCGTCA TTAAGGATGT TGCGGAGCGC GGCGCTCCCA CCGTTGCGAT CCTGATCAGG CAATTGTGCA GCCAAATCTT CGCATACGCG GCGGGTGAAG AGCTTTGCGA CAGTGATCCG ACGGCGCTGC TGAAACGGTC GGTCAAGCGC CCCCGAGTTC GACACCATCC ACCGCTACCG TGGCAAGAGA TCCCGAAGTT CTTGAGCCGT GTGGATGATG CAGGTTACCG GGTCACTGTC ATTGCACTGC GATTGATGGC CCTCACTTAT GTCCGCACGG CCGAACTGCG CAAGGCGCAC TGGTCCGAGT TCGATCTGGA CAGTGCGATG TGGACGGTTC CTGCGGGGCG CATGAAGATG CGCGACCCTC ACATCGTTCC GCTCTCGAAG CAGGCCATCG TGCTGTTGAA AGAACTGCAC ACGCTGACAG GCGGAGGGAA GGTGCTGTTT CCCGGCTTCA GGAAGCCGGG AACGGTTATG TCGGCTACGA CGCTCAACAA GGTGTTGGAG CGCATGGGCT ACGGTGGACA GTTTTCTTCG CACGGCTTCC GCTCAACAGC GACCACGCTG CTCGGCTTGT TGAGCTACCC CGAGAACCGG GTTGACCTGC AACTGGCCCA CTCGAAGCGG AAGAAAGATT CGTCGCGCGC ACCCTACGAT CACACCAAGT ACATCGCATC GCGGAAGATC ATCATGCAGG ATTGGGCGGA CATCCTCGAT GCGATGGCTC GTGGCGATTC GATGAACGAG GTCATGGCAA CCTTCGGGCC GCTGTCGAAA CGGCGCAGGG CCTTGCTGCG GGTCATCGAG CGGGAGTGA
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Protein sequence | MAMNLLSARK VETIPSQKEP YWLKDGGSLF LYVTPSGSKL WRYRYRLGGK PAIYAIGKYP QVSLEAARTE RDRARELVKK GVHPVVEKRV NISTQLEKNE NTFEPVARRW MASNVQWSEG YADQVKRTLE NDVFPKVGKL PVSSIRTAHL RPVIKDVAER GAPTVAILIR QLCSQIFAYA AGEELCDSDP TALLKRSVKR PRVRHHPPLP WQEIPKFLSR VDDAGYRVTV IALRLMALTY VRTAELRKAH WSEFDLDSAM WTVPAGRMKM RDPHIVPLSK QAIVLLKELH TLTGGGKVLF PGFRKPGTVM SATTLNKVLE RMGYGGQFSS HGFRSTATTL LGLLSYPENR VDLQLAHSKR KKDSSRAPYD HTKYIASRKI IMQDWADILD AMARGDSMNE VMATFGPLSK RRRALLRVIE RE
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