| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2716 |
|---|
| Symbol | |
|---|
| ID | 7316878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2860382 |
|---|
| End bp | 2861377 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643617617 |
|---|
| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| Protein accession | YP_002514778 |
|---|
| Protein GI | 220935879 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.208385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CCCCTCGCAT CGCCATCACC CCCGGTGAAC CCGCCGGCAT CGGTCCCGAC
CTGGTGGTCG CGGTCGCCCA GGTGCCGTGC GCGGCCCAGC GGGTGGTGCT GTCGGACCCG
GCGCTGCTGC GCGAGCGCGC GCGCCTGCTC GGCCTGCCGC TGGAGATCCG CCCCTTCGAT
CCGCAGACCC CGGCCGCCCC CGACCCGGCG GGCTGCCTCA CGGTCATGGC CCATGCCCTG
AACGCCCCGG TGCGGCCCGG GCACCTGGAC ACGGCCAACG CCCGCCACGT GCTGGCCACC
CTGGAGAGCG CCGTGGCCGG CTGCCTGGAC GGGCGCTTCG ACGCCCTGGT CACGGGGCCG
GTGCACAAGG GCATCATCAA CGACGCCGGC ATCCCGTTCA CCGGCCACAC CGAGTTCCTG
GCCGAGCGCA GCGGCGCGCC CACCCCGGTG ATGCTGCTCG CGGCCGGCGC GCTGCGCGTG
GCCCTGGCCA CCACCCACCT GCCCCTGCGG GCCGTGGCCG ATGCCATCAC CCCGGCGGGC
CTGGAACATG TACTGCGGGT GCTCAATCAG GACCTGAAAA CAAAATTCGC GATCTCCGAA
CCGAGAATCC TGGTCTGTGG TCTAAATCCC CATGCCGGTG AAGGGGGTCA CCTGGGCCGG
GAAGAGATCG AGGTCATCGG CCCGGTGCTG GAGCGCCTGC GCACGCAAGG CCTGCACCTG
ATCGGCCCCC TGCCCGCAGA TACCCTGTTC ACACCCCGGC ACCTGGAACA CGCAGATGCC
ATCCTGGCCA TGTACCATGA TCAGGGCCTG CCGGTGCTCA AGCACGCGGG CTTCGGTCGC
GCCGTGAACA TCACCCTGGG CCTGCCCCTG ATCCGCACCT CCGTGGATCA CGGCACCGCC
CTGGAACTGG CGGGCAGCGG CCGGGCCGAG GCAGGCAGCT TCATGGAGGC TGAGCGCCTG
GCCATTGAGA TGGCCCGCTC GGCCCACGGT CTTTGA
|
|---|
| Protein sequence | MTTTPRIAIT PGEPAGIGPD LVVAVAQVPC AAQRVVLSDP ALLRERARLL GLPLEIRPFD
PQTPAAPDPA GCLTVMAHAL NAPVRPGHLD TANARHVLAT LESAVAGCLD GRFDALVTGP
VHKGIINDAG IPFTGHTEFL AERSGAPTPV MLLAAGALRV ALATTHLPLR AVADAITPAG
LEHVLRVLNQ DLKTKFAISE PRILVCGLNP HAGEGGHLGR EEIEVIGPVL ERLRTQGLHL
IGPLPADTLF TPRHLEHADA ILAMYHDQGL PVLKHAGFGR AVNITLGLPL IRTSVDHGTA
LELAGSGRAE AGSFMEAERL AIEMARSAHG L
|
|---|
| |