Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2709 |
Symbol | |
ID | 7316871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2850393 |
End bp | 2851427 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643617610 |
Product | lytic murein transglycosylase B |
Protein accession | YP_002514771 |
Protein GI | 220935872 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.31024 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGA CTTCCCTTGC GTTCGCAGAC CACCCCATGT CCCGTTTCCT GACTGTCCTG CTGCTTTCCC TCGCGCTGTC CGGCGCGGCC TGGGCGCAGC CGGCCTTCGT GGCCGGAGAT CCGCCCTACC TGGAACGCGA GGCGGTGCAG CAGTTCATCG ACGAGATGGT GGCCGAGGGT TTTGAGCGCC GCGAACTGGA GGCCCTGTTC CGGGGCGTGG AGCCCCAGCA GCGGGTGCTG GACCTGATCT CTGCACCTGC CGAGGCGCGG CCCTGGTACC GCTATCACCC CATCTTTCTC ACCGAGCAGC GCATCCGCGA GGGCGAACGT TTCTGGCGCG AGCACGACGA ACTGCTGGCG CGCGCCGAAC AGGAGTTCGG TGTGGAAGCG GCGGTGGTGG TGGCGATCAT CGGCGTGGAG ACCTTCTACG GCCGCAACCA GGGCGGTTTC CGGGTGCTGG ATGCCCTGGT CACCCTGGGC TTCGACTATC CGCCCCGGTC GCGCTTCTTC CGCTCCGAGC TGGGACACTT CCTGCGCCTG GCCCGTGAAG AGGGCCTGGA CCTGCGCGAC ACCCGCGGCT CCTACGCCGG CGCCATGGGG CGCGGCCAGT TCATCTCATC CAGCTACCGG GAATACGCGG TGGATTTCAG CGGCGATGGC CGCCGGGACC TGATCGGTTC CTGGCCCGAT GCCATCGGCA GCGTGGCCAA CTATTTCCGC CGTCACGGCT GGGCCCAGGG CGAACCGGTG GTGGCCCGCG CCGAGGTGCA GGGCGAGGCC TACCGGGCAC TCATGGGCGG CGGCTTCCAG GCCCGCCACA GCCTGGAGGA CCTGGCCCGG CACGGCGTGA CGCCCCGGGA GCCCGTGCCC GAGGACGGGC GTTTCTCCAT CATCGAACTG GAGACGGAAA ACGGCACCGA GGTCTGGCTG GGCTATCCCA ACTTCTACGT GATCACCCGC TACAACCGCA GCCCTCTGTA CGCCAAGGCG GTTCACCTGC TGGCGCAGGA GATCAGCCGG TCCATGACCA ATTGA
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Protein sequence | MSLTSLAFAD HPMSRFLTVL LLSLALSGAA WAQPAFVAGD PPYLEREAVQ QFIDEMVAEG FERRELEALF RGVEPQQRVL DLISAPAEAR PWYRYHPIFL TEQRIREGER FWREHDELLA RAEQEFGVEA AVVVAIIGVE TFYGRNQGGF RVLDALVTLG FDYPPRSRFF RSELGHFLRL AREEGLDLRD TRGSYAGAMG RGQFISSSYR EYAVDFSGDG RRDLIGSWPD AIGSVANYFR RHGWAQGEPV VARAEVQGEA YRALMGGGFQ ARHSLEDLAR HGVTPREPVP EDGRFSIIEL ETENGTEVWL GYPNFYVITR YNRSPLYAKA VHLLAQEISR SMTN
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