Gene Tgr7_2634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2634 
Symbol 
ID7315353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2776716 
End bp2777360 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID643617535 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002514696 
Protein GI220935797 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.207531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGGT CAGGCGCCCC CACCCGCCGG ATTCCTCTCC TCTCCAGCTT CTTGTATCGT 
GTCTCGGCGC CCAAACCCGA CACCCCGGTG ACCGATCCCA ACCCTGATCT GGAAAAACTG
CTCTCCGCCT GTGCTCTGGG TGACCGGGAC GCGTTTCAGC GGCTGTACCT GGCCACCTCG
CCGAAACTCT TTGGCATCGC CGTGCGTATA TTGGGGAGCG AGGCCCAGGC GGAGGAGTGT
CTGCAGGACG CCTATGTGAA GATCTGGCAG CGGGCCGGGG ACTACCGACC CCATCTGGCC
AGCCCGGTCA CCTGGCTGGT GACCATCGTG CGCAACGGTG CCCTGGACCG CCTGCGTCGC
AACCGTCGCC AGCTGGAGCT GGCCGACCCC GCCCACCTGG AATTCCTCAT GGACGAACAT
GCCACGGCCC CGGGCCCGGC CGGCGAGGAG AGCGATGCCG TTCTGCTCAG GGAGTGCCTC
AAGCAGCTGC GCGAAGACCA GCGGCGCTGC ATCGAGATCG CCTATTTTGA AGGACTGAGC
CATGGCGAAG TGGCCGAGCG CACCGGCAAT GCGCTGGGCA CGGTCAAGAC CTGGATACGT
CGCGGACTGC AGGAATTGAG GAGGTGTCTC GATGCCTCAG TCTGA
 
Protein sequence
MPRSGAPTRR IPLLSSFLYR VSAPKPDTPV TDPNPDLEKL LSACALGDRD AFQRLYLATS 
PKLFGIAVRI LGSEAQAEEC LQDAYVKIWQ RAGDYRPHLA SPVTWLVTIV RNGALDRLRR
NRRQLELADP AHLEFLMDEH ATAPGPAGEE SDAVLLRECL KQLREDQRRC IEIAYFEGLS
HGEVAERTGN ALGTVKTWIR RGLQELRRCL DASV