| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2618 |
|---|
| Symbol | |
|---|
| ID | 7315337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 2760863 |
|---|
| End bp | 2762224 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643617519 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_002514680 |
|---|
| Protein GI | 220935781 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.153552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC AGCACGTACT CATCGTCGAC GACGAGCCCG ACATCCGCGA ACTCCTGGAG
ATCACCCTGG GGCGCATGAA GCTCAGCACC CACGCCGCGG GCAGCGTCAC CGAGGCCCGG
GCGCTGCTCT CCAGGCATGA CTTCGACCTG TGCCTGACCG ACATGCGCCT GCCCGACGGC
AACGGCATTG AGCTGGTGGA ACACATCCAG CGACACTGCC CCTGCCTGCC GGTGGCGGTG
ATCACCGCCT ACGGCAGCAT GGACACCGCC GTGGCGGCGC TCAAGGCCGG CGCCTTCGAC
TTCGTCTCCA AGCCCGTGGA CCTGTCCATG CTGCGGGACC TGATCAACAC CGCCCTGCGG
CTCTCGGAGA AGGACAAGGC GCGGGAGAGC AGCGAGGATC ATGACGACGG CTCCCAGCTA
CTGGGCCAGG CGCCGGCCAT GCGCAAGCTC AAGGAGACCA TCGCCAAGCT CGCCCGCAGC
CAGGCGCCGG TGTGCATCCT GGGCGAGTCG GGCAGCGGCA AGGAGCGGGT GGCCCGGGAG
ATCCACCGCC TGGGTCCGCG GGCGGAGCGG CCGTTCGTGC CGGTGAACTG CGGCGCCATC
CCCACGGAGC TCATGGAGAG CGAGTTCTTC GGCCACGTGA AGGGCGCCTT CACCGGCGCG
ACCGGAGACC ATCCCGGCCT GTTCCAGTCC GCCCAGGGCG GCACCCTGTT CCTGGACGAG
GTGGCGGAAC TGCCCCTGCA CATGCAGGTG AAGCTGCTGC GCGCCATCCA GGAGCGGGCG
GTCAAGCCCG TGGGCGGCAG CCGCGAGATC CCCGTGGACG TGCGCATCCT CTCCGCCACC
CACCGGGACC TGGCCGCCCT GGTGCGCGAG GGCCAGTTCC GCCAGGACCT CTATTACCGG
CTCAACGTCA TCGAACTGCG CGTGCCGCCG CTGCGCGAAC GCCTGGAGGA CCTGCCGCTG
CTGTCGCGCC GCATCCTCGC GCGCATCGCC CAGGACTGGG GCACCCAGCC GCCGCAGCTC
TCCGAGGACG CCCTGGCCGC GCTGCGCGCC TATCCCTTCC CCGGCAACGT GCGCGAACTG
GAGAACATCC TGGAGCGGGC CGCGACCCTG TGCGAGGGCG ATATCCTGGA GGCCGCCGAC
CTGCACCTGC CCGAAGCGGG CGCGCCCCTG GGCATCACCG CCCGAACCGG CGCCGACGGC
CTGCCCCTGG ACGACGTGCT GGAAGACCAG GAACGCCAGG CCATCCTCGC CGCCCTCGCC
AAGACCTCCG GCAACCGCAC CGCCGCCGCC AGGCTCCTCG GCATCAGCTT CCGCCAGCTG
CGCTACCGGC TGAAGAAGCT GGATATCGAT GTGCCGGGGT GA
|
|---|
| Protein sequence | MSIQHVLIVD DEPDIRELLE ITLGRMKLST HAAGSVTEAR ALLSRHDFDL CLTDMRLPDG
NGIELVEHIQ RHCPCLPVAV ITAYGSMDTA VAALKAGAFD FVSKPVDLSM LRDLINTALR
LSEKDKARES SEDHDDGSQL LGQAPAMRKL KETIAKLARS QAPVCILGES GSGKERVARE
IHRLGPRAER PFVPVNCGAI PTELMESEFF GHVKGAFTGA TGDHPGLFQS AQGGTLFLDE
VAELPLHMQV KLLRAIQERA VKPVGGSREI PVDVRILSAT HRDLAALVRE GQFRQDLYYR
LNVIELRVPP LRERLEDLPL LSRRILARIA QDWGTQPPQL SEDALAALRA YPFPGNVREL
ENILERAATL CEGDILEAAD LHLPEAGAPL GITARTGADG LPLDDVLEDQ ERQAILAALA
KTSGNRTAAA RLLGISFRQL RYRLKKLDID VPG
|
|---|
| |