Gene Tgr7_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2556 
Symbol 
ID7315653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2696350 
End bp2696967 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID643617458 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_002514619 
Protein GI220935720 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.596771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACTG ATATGGGAAC TCGCAGATAC ACACTCCGAA AGCGGGCCGA GGCGCAGGAG 
GACACGCGGG CGCGCATCGT CGATGCCATG ATCGAGGTGC ACCGGGACCT GGGGCCGCGC 
AACGCCACCG TCAGCGCCAT CGCTGAACGG GCGGGCGTTC AGCGTCTGAC CGTGTACCGC 
CATTATCCGG ACGATGCGAG CCTGTTCGAG GCCTGCACGT CCACCTGGCT GCAGCGCAAT 
CCACCGCCAG ATGCGGCTGA ATTCGAAGGG GTGTCCGATC CCGTGGCGCG CACACGGCAG 
GGTCTCGAGG CCTTGTATGC CTATTACGCA AGGACGCAGC GGATGTGGGC TGTCTCCTAC 
CGCGACGTCG GGGAGGTTCC GGCGCTGCAG GGGCCCATGG CCGGATTCGA GACCTGGCTG 
GATGCCTATC TTCAGGCCTT GCTGCGCGGC TGGCGGCTGC GTGGCCGCCG TCGTGAGCGC 
CTGGCCGATA CCCTGGCGCT GGCGCTGCGT TTCCACACCT GGCAGACACT GGACACACGG 
GGCCTCGACG ACGCGGCCAA GGCCGCACTG GTGATGGAGT GGCTTGCGGG CGTCGCGGGC 
GGAAGGCCGG CGCAATGA
 
Protein sequence
MITDMGTRRY TLRKRAEAQE DTRARIVDAM IEVHRDLGPR NATVSAIAER AGVQRLTVYR 
HYPDDASLFE ACTSTWLQRN PPPDAAEFEG VSDPVARTRQ GLEALYAYYA RTQRMWAVSY 
RDVGEVPALQ GPMAGFETWL DAYLQALLRG WRLRGRRRER LADTLALALR FHTWQTLDTR 
GLDDAAKAAL VMEWLAGVAG GRPAQ