Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2454 |
Symbol | |
ID | 7317156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2601457 |
End bp | 2603196 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643617358 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_002514519 |
Protein GI | 220935620 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.154303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGG TGGTTGAGAT CAAGGTGCCG GACATCGGCG ATTTCAAGGG CGTGGAGATC ATCGACGTCC TGGTGAAACC CGGTGACAAG GTCAAGCCGG AAGACCCGCT CATCACCCTG GAATCCGAGA AGGCCAGCAT CGACATCCCC GCGCCCCAGG CCGGCAAGGT CAAGGGGCTC AAGGTGAAGA AGGGCGGCAA GGTCTCCCAG GGCGACGCCA TCCTGGATCT GGAGGTGGAC GAGGCCGAGG CGGCCAAGCC CGCCGACAAG TCTGCCAAGT CCGAAGCCAA GGCACCGGCG GCCAAGGCCT CGGCCACCGC CCCCGGCGAC GCCGACATCA ACTGCCAGCT ACTGGTACTG GGTTCCGGTC CTGGCGGCTA CACCGCCGCC TTCCGCGCCG CAGACCTGGG CCTGGACGTG GTCATGGTGG AGCGTTACGC CGAGATCGGC GGCGTGTGCC TGAACGTGGG CTGCATCCCC TCCAAGGCCC TGCTGCATGC GGGCCAGGTG ATTGAGGAGG CCGAGGCCTT TGCCGAGCAC GGCATCACTT TCGGCAAGCC CAGGATCGAC CTCAAGAAAC TGGCCAGCTA CAAGGACGGC GTGGTGGGCA AGCTCACCGG CGGCCTCAAG CAGCTGGCCA AGCAGCGCAA GGTGCGCGTG GTCCATGGCA CGGGGCAGTT CTCCTCTGCC AACACCCTCA CGGTGGAGGG CAAGGACGGC ACGCAGGTGA TCGGTTTCGA GCAGGCCATC ATCGCCGCCG GCTCCCAGGC GGTGAAGCTG CCCGGCTTCC CTTGGGACGA CGAACGCGTC ATGGATTCCA CCGACGCCCT GATGCTCAAA GACGTGCCCA AGCGCCTGCT GGTGGTGGGC GGCGGCATCA TCGGCCTGGA AATGGCCTGT GTCTACGACG CCCTGGGCGC CAAGGTGACG GTCTGCGAAC TGTCCAACGA GCTCATGCCC GGCGCCGACC GCGATCTGGT GCGGCCGCTG GAGAAGCGCA TCAAGGGCCG CTACGAGGCC ATCTACACCG GCACCAAGGT GGCCAGGGCC GAGGCCACCA GGCAGGGCAT CAAGGTGAGC TTCGAGGGCG GCAAGGCCCC GGAGACAGAC ACCTTCGACC GGGTGCTGGT GGCCGTGGGC CGCAGCCCCA ACGGCAAGAA GATCAATGCC GAGGCCGCAG GCGTGCAGGT GGATGAGCGC GGTTTCATCA ACGTGGACAA GCAGCAGCGC ACCAACGTGG CCCACATCTT CGCCATCGGC GACATCGTCG GCCAGCCCAT GCTGGCCCAC AAGGCGGCCC ATGAGGGCAA GGTGGCCGCC GAGGTCGCCG CCGGCGAGAA GTCCCACTTC GACGCCCGGG CCATCCCCTC CGTGGCCTAC ACCCACCCGG AGGTGGCCTG GATGGGCATC ACCGAGACCG AGGCCAAGGC CCAGGGCATC GAGTACACCA AGGGCGTGTT CCCCTGGGCC GCCAGCGGCC GGGCCATCAG CGTGGGCGGC GACAGCGGCC TGACCAAGCT GCTGTTCGAC GAACACGGCC GGGTGATGGG CGCCGGCATC GTCGGCCCCA ACGCTGGCGA GCTGATCGGC GAGACGGTGC TGGCCCTGGA GATGGGTGCC GACATGGAAG ACATCGGCCT GACCGTGCAC CCCCACCCGA CCCTGTCCGA AACCATCTGC TTCGCCGCTG AGGTGGCCCA CGGCAGCGTC ACGGACATCA TGGCGCCCAA GCGGAAGTAG
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Protein sequence | MGKVVEIKVP DIGDFKGVEI IDVLVKPGDK VKPEDPLITL ESEKASIDIP APQAGKVKGL KVKKGGKVSQ GDAILDLEVD EAEAAKPADK SAKSEAKAPA AKASATAPGD ADINCQLLVL GSGPGGYTAA FRAADLGLDV VMVERYAEIG GVCLNVGCIP SKALLHAGQV IEEAEAFAEH GITFGKPRID LKKLASYKDG VVGKLTGGLK QLAKQRKVRV VHGTGQFSSA NTLTVEGKDG TQVIGFEQAI IAAGSQAVKL PGFPWDDERV MDSTDALMLK DVPKRLLVVG GGIIGLEMAC VYDALGAKVT VCELSNELMP GADRDLVRPL EKRIKGRYEA IYTGTKVARA EATRQGIKVS FEGGKAPETD TFDRVLVAVG RSPNGKKINA EAAGVQVDER GFINVDKQQR TNVAHIFAIG DIVGQPMLAH KAAHEGKVAA EVAAGEKSHF DARAIPSVAY THPEVAWMGI TETEAKAQGI EYTKGVFPWA ASGRAISVGG DSGLTKLLFD EHGRVMGAGI VGPNAGELIG ETVLALEMGA DMEDIGLTVH PHPTLSETIC FAAEVAHGSV TDIMAPKRK
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