Gene Tgr7_2451 details

Gene Information

• Locus tag: Tgr7_2451
• ID: 7317153
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thioalkalivibrio sp. HL-EbGR7
• Kingdom: Bacteria
• Replicon accession: NC_011901
• Strand: -
• Start bp: 2597054
• End bp: 2599009
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643617355
• Product: putative diguanylate cyclase
• Protein accession: YP_002514516
• Protein GI: 220935617
• COG category: [P] Inorganic ion transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
• TIGRFAM ID: [TIGR00229] PAS domain S-box; [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.20107
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAG GCTCATGGTC ATCTGCCTGG CGCAAGCCCG TGGTAGTCGC GGCCTCGGTC 
TGCCTGTGGC TGCTGGTCTT CGCATCGCCC ATCAAGGCCT GGCATCACCA CGATGAGATC 
ACCATCGGCG TGCTGGCCTT CCGAGGCATG GACGAGGCGG TGCGCATGTG GTCGCCCACC 
GCCGAGTACC TGGAATCGCA ATTGCCCGGC GTGCAGTTCC GCATCCTGCC GCTGACCAAT 
GACACCATCG AGGAGGCCGT GGCCAGTGGC GAGGCGGATT TCGTCATCAC CAACTCCGGT 
TCCTACGTGG CACTCAACCA GCGCCACGGT ATCACCCGCA TCGCCACCCT GATCAGCCAG 
CGCCCCACCG GCACCTCCAC CCGCTTCGGT GCGGTGATCA TCAGCCGGGC CGACCGCGAC 
GACATCCGCG AGATCGCTGA TCTGCGCGGC AAGCGATTCG CCGCCATCCA TCCGGATGGT 
TTCGGTGGCT GGTGGATGGG CTGGAAGGAA CTGCGTGATC ACGGCATCGA GCCGCTGCAG 
GACATGCAGC TGGAATTCAC CGGATTTCCG GTGGACCTGG TCATGGAGGC GGTGCGTTCA 
GGCCAGGTGG ATGCCGGCAC CTTCCGCACC GAACTGCTGG AACAGTGGAT CAATGAGGGG 
CGTATCCGCG CCGACGAGTT TCATGTCCTC AATGCCCGGA CCACGCCGGG TTTCCCGTTC 
CTGCACAGCA CCCGCCTGTA CCCGGAATGG CCGCTGGCGG TGCAGCCGGA CATGGACGAG 
GATCTGGCCA AGCGGGTGCT CCAGGCCCTG TTCGCACTGC CGCAAGGTCA CCCCGCGCTG 
GATGCCGCCG AGATCGCCGG CTGGACCATC CCGCTCAACT ACGATCCGGT CCATGACCTG 
ATGCGCGAAC TCAAGGTAGG CCTCTACCAG CCCGACGAGG TGATCACCCT GCGCGAGGTG 
CTCACCGTCT ATGGCCCCTG GTTCGCCGGG ATCCTGGGCA TCCTGCTCAC CGGTTTCCTG 
GCCTTCGTGA TGCGGCTGAA CCGCAGTCTG ACCGCCTCCC GGGTGAGCCT GGCCAACACC 
CTGCGCTCCA TCGGCGACGC GGTGGTGACC ACCGACACCC AGGGCCTGAT CCAGTACATG 
AATCCGGTGG CCGAGCGCAT GGGGCATTGC AGCCTGCCGG ATGTCCAGGG CCATGACTAC 
CGGCAGGTGT TCCACCTGGT GGACGAGTCC AGCCGCAAGG AACTGGGCAA CCTCGCCCGC 
CACAGCGCCA GCATGCGGGA GCCGCGGCCG TACACCTTCG ACGGCCTGCT GCTGGGTCGC 
GACGGCCAGG AATACTCGGT GAAGATCACC ACCTCCACCA TCCGCGCCGG GCTCAGCCGG 
GTCTCGGGCT GCGTGCTGGT GATCCATGAC GTAACGGAAC TGCGCACCCT GGCACGCCAG 
CTCAAGTTCC AGGCGGCCCA CGACCCGCTC ACCGGCCTGG TCAACCGCCG GGAGTTCGAG 
ACCCGCTTGT CCCGGGCCGT GGATGGCAGC CAGAAGAGCG GCCAGACCCA CGTGCTGATC 
TTCCTGGACC TGGACTGGTT CAAGGCCATC AACGACACCC TGGGCCATGC CGCCGGCGAC 
CAGGTGCTCA GGGAGGTGGC CGACATGCTG GAACGGCAGG TGCGTTCCAC GGACACCGCC 
GCCCGGATCG GCGGCGACGA GTTCGGCATC CTGCTCCTGA ACTGCGAACT GGAGGCGGGG 
ATCGCCGTGG CGGAGAAGCT GCGCGATGCC ATTGCCGGCT ACAGCTACGT ATCCGGGGGA 
GAGACCTACC GGGTGGGCGT GAGCCAGGGA CTGGTGCTCA TCGATCGGCA AAGCGGAAAC 
CTGGGTGCGA TCCTCAAGGC GGCCGACGAG GCCTGTTACA CTGCCAAGGA ACACGGCCGC 
AACCGCTATC ACGTATACTC CAGCGACCCC AGTTGA 

 

Protein sequence

MKQGSWSSAW RKPVVVAASV CLWLLVFASP IKAWHHHDEI TIGVLAFRGM DEAVRMWSPT 
AEYLESQLPG VQFRILPLTN DTIEEAVASG EADFVITNSG SYVALNQRHG ITRIATLISQ 
RPTGTSTRFG AVIISRADRD DIREIADLRG KRFAAIHPDG FGGWWMGWKE LRDHGIEPLQ 
DMQLEFTGFP VDLVMEAVRS GQVDAGTFRT ELLEQWINEG RIRADEFHVL NARTTPGFPF 
LHSTRLYPEW PLAVQPDMDE DLAKRVLQAL FALPQGHPAL DAAEIAGWTI PLNYDPVHDL 
MRELKVGLYQ PDEVITLREV LTVYGPWFAG ILGILLTGFL AFVMRLNRSL TASRVSLANT 
LRSIGDAVVT TDTQGLIQYM NPVAERMGHC SLPDVQGHDY RQVFHLVDES SRKELGNLAR 
HSASMREPRP YTFDGLLLGR DGQEYSVKIT TSTIRAGLSR VSGCVLVIHD VTELRTLARQ 
LKFQAAHDPL TGLVNRREFE TRLSRAVDGS QKSGQTHVLI FLDLDWFKAI NDTLGHAAGD 
QVLREVADML ERQVRSTDTA ARIGGDEFGI LLLNCELEAG IAVAEKLRDA IAGYSYVSGG 
ETYRVGVSQG LVLIDRQSGN LGAILKAADE ACYTAKEHGR NRYHVYSSDP S