Gene Tgr7_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2113 
Symbol 
ID7318217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp2238861 
End bp2241173 
Gene Length2313 bp 
Protein Length770 aa 
Translation table11 
GC content69% 
IMG OID643617008 
ProductGTP diphosphokinase 
Protein accessionYP_002514180 
Protein GI220935281 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.978919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA TGGCCCGCCC GCGGGCCTTT TGTTTCTCTT GTCTCTTGCC TCTTGTATCT 
TGTCTCTCGC GCCTCATGAA ACACACCCAC TATCACAAGA AGCACGTCTC CGACGCCCCG
CTCCACGAGC TGGAGGCGCG CTTCGCCTCG GCGCCGGGGG AGGGCAGGGA CGAGCAGCTC
CTGGAGGCCC TGCGCACCGC GGTCGCCTAC CGCCCCGAGG ATCCCCAGCG TCCTTGCGCC
CTGGACGTGG CCGAGATCCT TCGCCTGCTG GGGGTGGACC GTGAGACCCT GATCGCCACC
CTGCTGCTGG ATGCCTTCCT GGACAAGCGC CTGACCGAGG CGCGCCTGCG TGAGCACTTC
GGCGAGGCCG TCGCCGCCCT GGTGCGCAGC GTGCACTGGA TGCTCACCTT GTTCGACGCT
TCCATGCGCC TCACCCCTCC GGGGCTTGCG CGACGAATCG CTCCCGGCGA TTCGTTCAAG
GAAGAACCCC CCCGCGAGTC GGGCGCCGGC CCGGAGCAGG CCGAGCGCCT GCGCCGCCTG
CTGCTGGCGG TGGTGGAGGA CGTGCGCGCG GTGCTCATCA AGCTGGCCTA CCGGGTGCAG
CGTCTGCGCC TGCTGGCCAC CGAACCCGAT GACCTGGCCC GGGCCTATGC CCGGGAGACC
CTGGAGGTGT TCGCGCCCCT GGCCCACCGT CTCGGCATCG GCCAACTCAA GTGGGAGATG
GAGGACCTGT CCTTCCGCAT CCTGGAGCCG TCCGAGTACC GGCGCGTGGC CAGGCTGCTG
GAAGAGAGCC GCACCGAGCG CGAGACCTAC ATCCGGGAGT TCATGGAGCG CCTGGAGACG
GCGTTGCGCC CCGAGGGCAT CGAGGCCCGG GTGCTGGGAC GGCCGAAACA CATCTACAGC
ATCTGGCGCA AGATGGAGCG CAAGCAGCTG GACTTCGAGG AGCTCTACGA CCTGCGCGCC
GTGCGGGTGA TCGTGGACCG CATCCCCACC TGCTACACGG TGCTGGGCGT GGTGCACGGC
CTCTGGCCCC ACATCCCCCA GGAGTTCGAC GACTACATCG CCAATCCCAA GGACAACGGC
TACCAGTCTC TGCACACCGC GGTGATCGGC CCCAGGGCCA AGGTGGTGGA GGTGCAGATC
CGCACCCAGG CCATGGACGA CTTCGCCGAG CTGGGTGTGG CCGCCCACTG GCGCTACAAG
GAGGGCGGCC GGGAGGATCA GGCCATGGGC CGGGCCATCG GCTCCCTGCG TCGCCTGCTG
GAGAATCGCG AGGACGACGA GGCCCTGATG GACAGCTTCC GTTCCGAGCT GTTCCAGGAC
CGGGTGTTCG TGCTCACCCC CAAGGGCGAT GTGGTGGACC TGCCCAAGGG CGCCACGCCC
CTGGACTTCG CCTACGCCAT CCACACCGAG GTGGGCCATC GCTGCCGGGG CGCCAAGGTG
GACGGGCGCA TCGTGCCGCT GACCTATGCC CTGCGCTCCG GGCAGCGGGT GGAGGTGCTC
ACCACCCGCC AGGGCGGACC CAGCCGCGAC TGGATCAATC CCAGCATGGG CTACCTGCGC
ACCTCCCGGG CGCGGGGCAA GGCCCGGTCC TGGTTCAAGC TCCAGGACCA CGATCGCAAC
CTGCACGAAG GTCGCGTGAT CCTGGACCGG GAGTGCCAGC GCATGGGGGT CGCAAACCCG
GACCTGGAGG CCCTGGCGAA GCGTTTCCAC CAGCCCACCA GGGATGAGTT CCTGGTGGCC
GTGGGCGCCG GCGACATCAC CCCCGCCCAG CTGGCCGGGG CCCTGCAGCC CGTGGCCCCG
CCGGTGGAGA GCCTGGTCTC CACCCGGCGG CGCAAGCGCG CTCCCGCGCC CGCCGGCGGC
GAGAAATCCG AGATCCACAT CCGCGGCGTG GGCAACCTGC TCACCCAGAT CGCCCGCTGC
TGCCGGCCCG TGCCCGGCGA CCCCATCATC GGCTTCATCA CCCGGGGCAA GGGCGTGACC
ATCCACCGCC GTGACTGCGT GAACATCCTG CGCATGCCGC CGGAGAAGAA GGTGCGCCTG
GTGGAAGTGA GCTGGGGCGC CGAGCCCCGG TCCTACCCGG TGAACATCCG CATCGAGGCT
TTTGACCGCC AGGGTCTGCT GCGGGACATC ACCGGCGTGC TGGCCAACGA TCGGATCAAC
GTCCTGTCCG CCAACACCCG CACCGACCGT TCGGATCAGA CGGTGACCAT GGAGCTGACC
CTGGAGGTGG AAGGCAGCGC CCAGCTGAGC GCCCTGATGG ACAAGATCGG CGCCCTGCCC
AACATCACCA GCGTGCGCCG CTCGGCGGGC TGA
 
Protein sequence
MKQMARPRAF CFSCLLPLVS CLSRLMKHTH YHKKHVSDAP LHELEARFAS APGEGRDEQL 
LEALRTAVAY RPEDPQRPCA LDVAEILRLL GVDRETLIAT LLLDAFLDKR LTEARLREHF
GEAVAALVRS VHWMLTLFDA SMRLTPPGLA RRIAPGDSFK EEPPRESGAG PEQAERLRRL
LLAVVEDVRA VLIKLAYRVQ RLRLLATEPD DLARAYARET LEVFAPLAHR LGIGQLKWEM
EDLSFRILEP SEYRRVARLL EESRTERETY IREFMERLET ALRPEGIEAR VLGRPKHIYS
IWRKMERKQL DFEELYDLRA VRVIVDRIPT CYTVLGVVHG LWPHIPQEFD DYIANPKDNG
YQSLHTAVIG PRAKVVEVQI RTQAMDDFAE LGVAAHWRYK EGGREDQAMG RAIGSLRRLL
ENREDDEALM DSFRSELFQD RVFVLTPKGD VVDLPKGATP LDFAYAIHTE VGHRCRGAKV
DGRIVPLTYA LRSGQRVEVL TTRQGGPSRD WINPSMGYLR TSRARGKARS WFKLQDHDRN
LHEGRVILDR ECQRMGVANP DLEALAKRFH QPTRDEFLVA VGAGDITPAQ LAGALQPVAP
PVESLVSTRR RKRAPAPAGG EKSEIHIRGV GNLLTQIARC CRPVPGDPII GFITRGKGVT
IHRRDCVNIL RMPPEKKVRL VEVSWGAEPR SYPVNIRIEA FDRQGLLRDI TGVLANDRIN
VLSANTRTDR SDQTVTMELT LEVEGSAQLS ALMDKIGALP NITSVRRSAG