Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_2113 |
Symbol | |
ID | 7318217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 2238861 |
End bp | 2241173 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643617008 |
Product | GTP diphosphokinase |
Protein accession | YP_002514180 |
Protein GI | 220935281 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.978919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAAA TGGCCCGCCC GCGGGCCTTT TGTTTCTCTT GTCTCTTGCC TCTTGTATCT TGTCTCTCGC GCCTCATGAA ACACACCCAC TATCACAAGA AGCACGTCTC CGACGCCCCG CTCCACGAGC TGGAGGCGCG CTTCGCCTCG GCGCCGGGGG AGGGCAGGGA CGAGCAGCTC CTGGAGGCCC TGCGCACCGC GGTCGCCTAC CGCCCCGAGG ATCCCCAGCG TCCTTGCGCC CTGGACGTGG CCGAGATCCT TCGCCTGCTG GGGGTGGACC GTGAGACCCT GATCGCCACC CTGCTGCTGG ATGCCTTCCT GGACAAGCGC CTGACCGAGG CGCGCCTGCG TGAGCACTTC GGCGAGGCCG TCGCCGCCCT GGTGCGCAGC GTGCACTGGA TGCTCACCTT GTTCGACGCT TCCATGCGCC TCACCCCTCC GGGGCTTGCG CGACGAATCG CTCCCGGCGA TTCGTTCAAG GAAGAACCCC CCCGCGAGTC GGGCGCCGGC CCGGAGCAGG CCGAGCGCCT GCGCCGCCTG CTGCTGGCGG TGGTGGAGGA CGTGCGCGCG GTGCTCATCA AGCTGGCCTA CCGGGTGCAG CGTCTGCGCC TGCTGGCCAC CGAACCCGAT GACCTGGCCC GGGCCTATGC CCGGGAGACC CTGGAGGTGT TCGCGCCCCT GGCCCACCGT CTCGGCATCG GCCAACTCAA GTGGGAGATG GAGGACCTGT CCTTCCGCAT CCTGGAGCCG TCCGAGTACC GGCGCGTGGC CAGGCTGCTG GAAGAGAGCC GCACCGAGCG CGAGACCTAC ATCCGGGAGT TCATGGAGCG CCTGGAGACG GCGTTGCGCC CCGAGGGCAT CGAGGCCCGG GTGCTGGGAC GGCCGAAACA CATCTACAGC ATCTGGCGCA AGATGGAGCG CAAGCAGCTG GACTTCGAGG AGCTCTACGA CCTGCGCGCC GTGCGGGTGA TCGTGGACCG CATCCCCACC TGCTACACGG TGCTGGGCGT GGTGCACGGC CTCTGGCCCC ACATCCCCCA GGAGTTCGAC GACTACATCG CCAATCCCAA GGACAACGGC TACCAGTCTC TGCACACCGC GGTGATCGGC CCCAGGGCCA AGGTGGTGGA GGTGCAGATC CGCACCCAGG CCATGGACGA CTTCGCCGAG CTGGGTGTGG CCGCCCACTG GCGCTACAAG GAGGGCGGCC GGGAGGATCA GGCCATGGGC CGGGCCATCG GCTCCCTGCG TCGCCTGCTG GAGAATCGCG AGGACGACGA GGCCCTGATG GACAGCTTCC GTTCCGAGCT GTTCCAGGAC CGGGTGTTCG TGCTCACCCC CAAGGGCGAT GTGGTGGACC TGCCCAAGGG CGCCACGCCC CTGGACTTCG CCTACGCCAT CCACACCGAG GTGGGCCATC GCTGCCGGGG CGCCAAGGTG GACGGGCGCA TCGTGCCGCT GACCTATGCC CTGCGCTCCG GGCAGCGGGT GGAGGTGCTC ACCACCCGCC AGGGCGGACC CAGCCGCGAC TGGATCAATC CCAGCATGGG CTACCTGCGC ACCTCCCGGG CGCGGGGCAA GGCCCGGTCC TGGTTCAAGC TCCAGGACCA CGATCGCAAC CTGCACGAAG GTCGCGTGAT CCTGGACCGG GAGTGCCAGC GCATGGGGGT CGCAAACCCG GACCTGGAGG CCCTGGCGAA GCGTTTCCAC CAGCCCACCA GGGATGAGTT CCTGGTGGCC GTGGGCGCCG GCGACATCAC CCCCGCCCAG CTGGCCGGGG CCCTGCAGCC CGTGGCCCCG CCGGTGGAGA GCCTGGTCTC CACCCGGCGG CGCAAGCGCG CTCCCGCGCC CGCCGGCGGC GAGAAATCCG AGATCCACAT CCGCGGCGTG GGCAACCTGC TCACCCAGAT CGCCCGCTGC TGCCGGCCCG TGCCCGGCGA CCCCATCATC GGCTTCATCA CCCGGGGCAA GGGCGTGACC ATCCACCGCC GTGACTGCGT GAACATCCTG CGCATGCCGC CGGAGAAGAA GGTGCGCCTG GTGGAAGTGA GCTGGGGCGC CGAGCCCCGG TCCTACCCGG TGAACATCCG CATCGAGGCT TTTGACCGCC AGGGTCTGCT GCGGGACATC ACCGGCGTGC TGGCCAACGA TCGGATCAAC GTCCTGTCCG CCAACACCCG CACCGACCGT TCGGATCAGA CGGTGACCAT GGAGCTGACC CTGGAGGTGG AAGGCAGCGC CCAGCTGAGC GCCCTGATGG ACAAGATCGG CGCCCTGCCC AACATCACCA GCGTGCGCCG CTCGGCGGGC TGA
|
Protein sequence | MKQMARPRAF CFSCLLPLVS CLSRLMKHTH YHKKHVSDAP LHELEARFAS APGEGRDEQL LEALRTAVAY RPEDPQRPCA LDVAEILRLL GVDRETLIAT LLLDAFLDKR LTEARLREHF GEAVAALVRS VHWMLTLFDA SMRLTPPGLA RRIAPGDSFK EEPPRESGAG PEQAERLRRL LLAVVEDVRA VLIKLAYRVQ RLRLLATEPD DLARAYARET LEVFAPLAHR LGIGQLKWEM EDLSFRILEP SEYRRVARLL EESRTERETY IREFMERLET ALRPEGIEAR VLGRPKHIYS IWRKMERKQL DFEELYDLRA VRVIVDRIPT CYTVLGVVHG LWPHIPQEFD DYIANPKDNG YQSLHTAVIG PRAKVVEVQI RTQAMDDFAE LGVAAHWRYK EGGREDQAMG RAIGSLRRLL ENREDDEALM DSFRSELFQD RVFVLTPKGD VVDLPKGATP LDFAYAIHTE VGHRCRGAKV DGRIVPLTYA LRSGQRVEVL TTRQGGPSRD WINPSMGYLR TSRARGKARS WFKLQDHDRN LHEGRVILDR ECQRMGVANP DLEALAKRFH QPTRDEFLVA VGAGDITPAQ LAGALQPVAP PVESLVSTRR RKRAPAPAGG EKSEIHIRGV GNLLTQIARC CRPVPGDPII GFITRGKGVT IHRRDCVNIL RMPPEKKVRL VEVSWGAEPR SYPVNIRIEA FDRQGLLRDI TGVLANDRIN VLSANTRTDR SDQTVTMELT LEVEGSAQLS ALMDKIGALP NITSVRRSAG
|
| |