| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2080 |
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| Symbol | |
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| ID | 7316471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2208891 |
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| End bp | 2210126 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643616974 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002514147 |
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| Protein GI | 220935248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.473077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCACA CTGCCCATAT CCCAGAACAC CAGGCCGCCA GTCTGCTTGC CAAGGCCGCC
ATCGTCCTGA TGCCCATCGC CATCATGTTC TCCCGCTCCC TGGCGGAGCT GGCGGTGGTA
CTCGTAGGCG TGCTTTTTCT GGTCAGGAGC TACCGGACAA AGGAATGGGC TTGGGTCAAG
GAACCCTGGT TCATCGCCGC CCTGGTATTC ACGGCCTACC TCACCCTGAT CTCGGCCCCC
ATGGCTGTCC ACCCCGAGAT CGCCCTGCCC CATTCCCTGT TCTTCATCCG CTGGCCCCTG
TTCGCCGCCG CGTTGGCCTA CTGGGTGTTC GCAAGCCCGG AACTCAGGCG CTGGTTCGAA
GTAACGATCG CAGCGATCGT GGTCTTCATC ATTGCCGACA GCCTGCTTCA GTACTTCACG
GGATCCGACA TTTTCGGAAA AGCGCCGCAC AGCACGACCC GCCTCACGGG GCCCTTTGAC
CGCCCGGTTC CTGGCACTTA TACGCTACGG ATCATCTTCA TCGCTCTGGC CGCACTCTAT
TTCAGCCAGC ACCTGAAAAA CGACCTGACA AGGAACATCA CGCTGCTGGC CGCACTTTCT
ATCGGCGCCG CCTTCATGTT CCTGACAGGA GAGCGTGTGG CCTTCATGAG CTTCCTGCTG
GGCAGTGGCA TCGTGATCCT GGCCTTGATC ATGACCCAGA AACGAGGACG TCTCTGGATC
CTTTTGGGTG GCGCCCTGCT GGCAATCGCC ATCGCCGGGG CACTTGCCAC ACAACCCAAG
ATGGTCGAGC GGACCATTGG GAGCACCGCG AGCACGATTG GCAATTTCAA CGAATCTCCC
TACGGCCTAG TTTACGGCAA CGCCCTGATG CTCTGGAGAG ACGCCCCCTG GACAGGGGTC
GGCATCAAAA ATTATCGCCC TATCTGCAAA GATGTAACCC AAGACCCAAG CATTGAAGGC
TGGTTCTGCT CACACCCGCA CAACACCTAT GTCGAAATCC TGGCGGAAGG CGGGCTGATC
GGGGTATTGC TCTTCAGCAC GATGCTGGCA TTGATCTTGT GGCACTTCCT CAAGGCCATC
CCACGACAAG CCATGACCGC GGGCTTCGCC ATAGCCCTCT TCCTGGCCAC CTTCTGGCCC
ATCATGTCGA CCATGAGTAT CACCAGCGGG TGGATTGCCG CGATTATCTG GATGGGCATG
GGATGGGCCA TTAACGTGAC CCGGGGAGAA GGGTAG
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| Protein sequence | MTHTAHIPEH QAASLLAKAA IVLMPIAIMF SRSLAELAVV LVGVLFLVRS YRTKEWAWVK
EPWFIAALVF TAYLTLISAP MAVHPEIALP HSLFFIRWPL FAAALAYWVF ASPELRRWFE
VTIAAIVVFI IADSLLQYFT GSDIFGKAPH STTRLTGPFD RPVPGTYTLR IIFIALAALY
FSQHLKNDLT RNITLLAALS IGAAFMFLTG ERVAFMSFLL GSGIVILALI MTQKRGRLWI
LLGGALLAIA IAGALATQPK MVERTIGSTA STIGNFNESP YGLVYGNALM LWRDAPWTGV
GIKNYRPICK DVTQDPSIEG WFCSHPHNTY VEILAEGGLI GVLLFSTMLA LILWHFLKAI
PRQAMTAGFA IALFLATFWP IMSTMSITSG WIAAIIWMGM GWAINVTRGE G
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