| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2048 |
|---|
| Symbol | |
|---|
| ID | 7316437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2177220 |
|---|
| End bp | 2178494 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643616940 |
|---|
| Product | Histidine--tRNA ligase |
|---|
| Protein accession | YP_002514115 |
|---|
| Protein GI | 220935216 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0124] Histidyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.167894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA CCCTGCAATC CATTCGCGGC ATGCACGACG TGCTGCCCGC CGATACCCCC
GCCTGGCAGT GGCTGGAAGC CGCCGCCCGC GAGCTGCTGG CCGGCTACGG CTATGAAGAG
ATCCGCATGC CCATCGTGGA GCAGACGGAG TTGTTCGCCC GCTCCATCGG CGAGGTCACC
GACATCGTCG AGAAGGAGAT GTACACCTTC GAGGATCGCA ACGGCGACAG CCTGACCCTG
CGTCCGGAGG GCACCGCCGG CTGCGTGCGC GCCGGCATCG AGCACGGCCT GCTGCACAAC
CAGCAGCAGC GGCTCTGGTA CATGGGCCCC ATGTTCCGCC ACGAGCGTCC CCAGAAGGGC
CGCTACCGGC AGTTCCACCA GATCGGCGTG GAGACCTTCG GCATGGACGG CCCCGACATC
GATGCCGAGC TGATCATCCT GACCGCGCGT CTGTGGCGGG TCCTGGGCCT GAAGGACGTG
CGACTGGAGA TCAACTCCCT GGGTTCCACC GAGGCCCGTG CCGCCTACCG GGCACTGCTC
GTCCAGCACT TCGAGGCCCA CGCCGAGGTG CTGGACGAGG ACGCCAGACG GCGCCTGCAC
AGCAACCCGC TGCGCATCCT GGACAGCAAG AACCCCGCCA TGCGCGAGGT GATCAGGAGT
GCCCCCAGCC TGCTGGACCA CCTGGATGAG GCCTCCCGGG CGCACTTCGA GGGCCTGAAG
GCCCTGCTCA CGGCGGCGGG CATCGAATTC ACGGTGAACC CGGCCCTGGT GCGCGGACTC
GATTATTACT GCCGGACCGT GTTCGAATGG ATCACCGAGT CCCTGGGCGC CCAGGGCACG
GTCTGCGCCG GAGGCCGGTA TGATGGCCTG GTGGAGCAGC TGGGCGGGCG GGCCACCCCG
GCGGCGGGTT TCGCCATGGG CCTGGAACGT CTGCTGGCCC TGGTGGAGGC GGGTGGTGCC
CGTCCGCCGG CACCGAAACC CCACGCCTAC CTGGCCCTGG CCGGGGAGGG CACCCAGGCC
GAGGGCCTGC GTCTGGCCGA GTCCCTGCGC GATGCGCTGC CGGGCCTGCG CCTGGTGGTC
AACGGCGGTG GCGGCGGTTT CAAGGCCCAG ATCAAGCGCG CCGACCGCAG CGGCGCGGAT
CTCGCCCTGA TCATCGGCGA GTCGGAGCTG GCCGAGGGCA CCATCCTGGT CAAGCCCCTG
CGCGAGGCCG GCGGCGAACA GCAGGCGGTG CCGCGGGACG GGCTCGCGGA GTTTCTGCGG
GCGCGGATTG GTTGA
|
|---|
| Protein sequence | MSKTLQSIRG MHDVLPADTP AWQWLEAAAR ELLAGYGYEE IRMPIVEQTE LFARSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTAGCVR AGIEHGLLHN QQQRLWYMGP MFRHERPQKG
RYRQFHQIGV ETFGMDGPDI DAELIILTAR LWRVLGLKDV RLEINSLGST EARAAYRALL
VQHFEAHAEV LDEDARRRLH SNPLRILDSK NPAMREVIRS APSLLDHLDE ASRAHFEGLK
ALLTAAGIEF TVNPALVRGL DYYCRTVFEW ITESLGAQGT VCAGGRYDGL VEQLGGRATP
AAGFAMGLER LLALVEAGGA RPPAPKPHAY LALAGEGTQA EGLRLAESLR DALPGLRLVV
NGGGGGFKAQ IKRADRSGAD LALIIGESEL AEGTILVKPL REAGGEQQAV PRDGLAEFLR
ARIG
|
|---|
| |