| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2014 |
|---|
| Symbol | |
|---|
| ID | 7316403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2136737 |
|---|
| End bp | 2137954 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643616906 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_002514081 |
|---|
| Protein GI | 220935182 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00685202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTCCC TTCCTGCGCA AAACCAGCGC GTGGTCTCCG GCATGCGGCC CACGGGCCGG
CTTCATCTGG GCCACTATCA CGGCGTCCTG AAAAACTGGA TCGAACTCCA GCATGCCTAC
GAGTGCCTGT TCTTCGTGGC CGACTGGCAT GCTCTGACCA CCCACTACGA GGACCCCCGC
ATCCTCTCCG AGAGCGTCTG GGACATGGTG GTGGACTGGC TGGCCGCGGG CGTGAGCCCG
GGCGCGGCGA AGATCTTCAT CCAGTCCCGG GTGCCGGAAC ACGCCGAGCT GCACCTGCTG
CTGTCCATGA TGACGCCGCT CGGCTGGCTG GAGCGCGTGC CCACCTACAA GGACCAGCAG
GAGAAGCTGC GCGAGAAGGA CCTGGCCACC TACGGCTTCC TAGGCTATCC GCTGCTGCAG
AGCGCCGACG TGCTGATCTA CAAGGCAGGC CTGGTGCCCG TGGGCGAGGA TCAGGTGGCC
CACATCGAGA TCACCCGGGA GGTGGCGCGG CGCTTCAACC ACCTCTACGG CCGTGAGCCG
GGCTTCGAAG AGAAGGCCGA GGCCGCCGTG GACAAGATGG GCAAGAAGAA CGCCAAGCTG
TACCGGGACC TGCGCCGCCG CTACCAGGAG CAGGGCGACG ACCAGGCCCT GGACGTGGCC
CGGGCCATGC TGGAGACCCA GCAGAACATC TCCCTGGGCG ACCGGGAGCG GCTGTTCGGC
TACCTGGAAG GCTCCGGCAA GATCATCCTG CCCGAGCCCC AGGCGCTGCT GACCCGGACC
TCCAAGATGC CGGGCCTGGA CGGGCAGAAG ATGTCCAAGT CCTACAACAA CACCATCTCC
CTGCGGGAAG ATCCGGCGGA AGTGGAGAAG AAGATCCGCA CCATGCCCAC GGACCCGGCC
CGGGTGCGCC GTACCGATCC CGGCGAGCCG GAGAAGTGTC CGGTGTGGGC CCTGCACCAG
GTCTACTCCG ACGAAGCCAC CTGCCAGTGG GTGCAGGAAG GCTGTCGCAG CGCGGGCATC
GGCTGCCTGG AGTGCAAGCA GCCGGTGATC GATGCGGTGC GTGCCGAGCT GCGCCCCATC
CAGGAACGCG CCAAGGACTA CGAGGCCGAC CCCGCGGCCG TGCGCACCAT CATCAACGAG
GGCTGCGAGG CGGCCCGGGA CATGGCCCGC GACACCCTCG ACGAGGTGCG TCGCGCCATG
GGGCTCTCCT ACCGATGA
|
|---|
| Protein sequence | MSSLPAQNQR VVSGMRPTGR LHLGHYHGVL KNWIELQHAY ECLFFVADWH ALTTHYEDPR
ILSESVWDMV VDWLAAGVSP GAAKIFIQSR VPEHAELHLL LSMMTPLGWL ERVPTYKDQQ
EKLREKDLAT YGFLGYPLLQ SADVLIYKAG LVPVGEDQVA HIEITREVAR RFNHLYGREP
GFEEKAEAAV DKMGKKNAKL YRDLRRRYQE QGDDQALDVA RAMLETQQNI SLGDRERLFG
YLEGSGKIIL PEPQALLTRT SKMPGLDGQK MSKSYNNTIS LREDPAEVEK KIRTMPTDPA
RVRRTDPGEP EKCPVWALHQ VYSDEATCQW VQEGCRSAGI GCLECKQPVI DAVRAELRPI
QERAKDYEAD PAAVRTIINE GCEAARDMAR DTLDEVRRAM GLSYR
|
|---|
| |