Gene Tgr7_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1965 
Symbol 
ID7316354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2086112 
End bp2086552 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content67% 
IMG OID643616858 
Productflagellar export protein FliJ 
Protein accessionYP_002514033 
Protein GI220935134 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2882] Flagellar biosynthesis chaperone 
TIGRFAM ID[TIGR02473] flagellar export protein FliJ 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.273851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTT CCAAACGCAT GCAACCCGTG GCCAACGTGG TCCACAACCG TCAGCAGAAC 
GCCGCGCGCG TGATGGGCGA GCGGCAGCGG GCCCTGGATG ATCAGCAGAA CCGCCTGCAG 
GAACTCAACA ACTACCGCGA CGAATACGCC AGGCGCTTCG AGGACGGCGG CGAGTCCATG 
GCGGGCATCA ACATGCGCGA CTACCGGCTG TTCCTCTCGC GGCTCAACGA GGCCATCGAG 
GAACAGGCCC GTCGGGTGGA ACTGGCGCGG GCCGCCCTGG AACAGAGCCG TGGCCAGTGG 
ACCGCCACCC GGGTGCACAG CGACGCGGTG AACAAGGTGG TGGAACGCAT GCAGGCCGAC 
GAGCGCCGCG ACGAGGACCG GCGCGAGCAG AAGGAAAACG ACGAGTTCGG GCAGCGCCCG 
CGTCGACCCC ACGACAAGTA A
 
Protein sequence
MTRSKRMQPV ANVVHNRQQN AARVMGERQR ALDDQQNRLQ ELNNYRDEYA RRFEDGGESM 
AGINMRDYRL FLSRLNEAIE EQARRVELAR AALEQSRGQW TATRVHSDAV NKVVERMQAD 
ERRDEDRREQ KENDEFGQRP RRPHDK