Gene Tgr7_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1958 
Symbol 
ID7316347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp2077834 
End bp2078523 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content71% 
IMG OID643616851 
Producthypothetical protein 
Protein accessionYP_002514026 
Protein GI220935127 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACC GCGAGACACC CTGGCTGTCG GTGGTGATCC CCGTGCTCAA CGAGGCCGAG 
GGCATCGGCG CATTGCTGGA ACAACTGGCG CCCCTGCGCG AACGGGGCGC CGAACTGATC 
CTGGTGGACG GCGGCAGCAG CGACGGCACC CGTGAAATAG CCGCCGGCTG GGTGGACCGT 
CTGCTGCAAC GGGGGCGGGG CCGGGCGCGG CAGATGAACG CCGGGGCCGC AGTGGCCCGG 
GGCGAGGTGC TGTGGTTCCT GCACGGCGAC AGCCGCATCC CGGAGGAGGC CGATGAACAC 
ATCCGCGAGG CCCTGTCCCG GCGGGCGTGG GGTCGCTTCG ACGTGCGTCT CTCCGGTGAG 
CAGCCGATGC TGAGGGTGGT GGAGCGGGCC ATGAACCTGC GCTCCTGCCT GACCGGCATC 
GCCACCGGCG ACCAGGGGAT GTTCCTGGGG CGCGAGGACT TCCAGTCCCT GGGCGGCTTC 
CCCGCCATCG AACTCATGGA GGACATCGCG CTGAGCAAGC GCCTGAAGCG CGCCCTGGGC 
CGCCCCGCCT GTGTGCGCAC GCCGCTCATC ACCTCCAGCC GCCGCTGGGA GACCCGCGGC 
ATCCTGCGCA CCGTTCTGCT CATGTGGTGG CTGCGCCTGG CCTATGCCCT GGGCGTGAAG 
CCGGCGCGCC TGGCGAGGTG GTACCGGTGA
 
Protein sequence
MDHRETPWLS VVIPVLNEAE GIGALLEQLA PLRERGAELI LVDGGSSDGT REIAAGWVDR 
LLQRGRGRAR QMNAGAAVAR GEVLWFLHGD SRIPEEADEH IREALSRRAW GRFDVRLSGE 
QPMLRVVERA MNLRSCLTGI ATGDQGMFLG REDFQSLGGF PAIELMEDIA LSKRLKRALG 
RPACVRTPLI TSSRRWETRG ILRTVLLMWW LRLAYALGVK PARLARWYR