| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1882 |
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| Symbol | |
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| ID | 7315212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2004608 |
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| End bp | 2005207 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616773 |
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| Product | TraF peptidase. Serine peptidase. MEROPS family S26C |
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| Protein accession | YP_002513950 |
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| Protein GI | 220935051 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.760081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGCCG TTTCCACTGG TGCCAACACC GCCGGAAAGG CGCCGCGTCC TCGTTCCCGC
CTGCGCGCTC GCATCGTGCT TGCGGGCCTG TCCGCCTGCG GCCTCGCTGC GCTGGCCTGG
GCGTCCTTCG TGCATCCGTT GCCGCGTCTG ATCTACAACC CGTCCGACAG TGTGGCGGTC
GGCTGGTATC GCGTCGATCC GCTGGGCCAA GGTGCCGGCT CGCTGCCACG TCCGTTATCC
GTTGGCAACA TCATCCTGAC CACGTTGCCG CCAGATGCCG CCGCGCTGGC CGCGCAGCGC
GGCTACCTGC CGGCGCGCGT GCCGTTGCTC AAGCGCGTGG GCGCCATCGC ACCGCAGGAG
GTGTGCATCA CTGGCCGCAT TGTCCGCATC GACGGCGTGC CTTCGGCCGC CGCGCTGCCT
GCTGATCGCT GGAGCCGGCC GCTGCCATCT TGGCAGCAAT GCCGTCGCCT CGAACCCGGC
GAACTATTCC TGCTCAGTAC GACCAACCCG GCGTCGTTCG ACAGCAGGTA CTTCGGGCCG
GTCAGCGCAT CCGCCGTGAT CGGCGTCGCG CATCCGGTCT GGCTGGAGTC TCGCCCATGA
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| Protein sequence | MTAVSTGANT AGKAPRPRSR LRARIVLAGL SACGLAALAW ASFVHPLPRL IYNPSDSVAV
GWYRVDPLGQ GAGSLPRPLS VGNIILTTLP PDAAALAAQR GYLPARVPLL KRVGAIAPQE
VCITGRIVRI DGVPSAAALP ADRWSRPLPS WQQCRRLEPG ELFLLSTTNP ASFDSRYFGP
VSASAVIGVA HPVWLESRP
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