Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1861 |
Symbol | |
ID | 7315191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1982656 |
End bp | 1984641 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643616752 |
Product | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC |
Protein accession | YP_002513929 |
Protein GI | 220935030 |
COG category | [E] Amino acid transport and metabolism [S] Function unknown |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) [COG4121] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCG CAACTGACAC AGGCGCCGGA TTCCAGCCCC TGGAGCCGGC GGTCCTGGAG TTTCGCGACG GCACGCCCTG GTCGTCGCGC TACGGCGACG TGTACTTCAG CCACGGCCAC GGCGCCGAGG AATCCCGCAC CGTGTTCCTT GAGGCCAACG GCCTGCCCGA ACGCTGGCTC GACCGGGATG TGTTCACCAT CGCCGAGACC GGCTTTGGCA CCGGGCTCAA CTTCCTGCTG ACCTGGGATC TCTGGCGCGG CCAGCCGGGA GCCGGCTGGC TGCACTACCT GAGCGTGGAA CTGCATCCCT TCACCCGCGA GGACCTGGCC CGGCTGATCT CCACCCTGCC CCGGGCATTG CGTGACCTGG GTGAGGCGCT GCTGGCCCAA TACCCGGCGC CGGTGCCCGG CTTTCACCGG CTGTTGTTCC CCGGGGAACG TCTGAGCCTC ACCCTGATGT TCGGCGATGC CGTGGACTGC CTGAGCCAGT GCCAGGCGCA GGTGGATGCC TGGTACCTGG ATGGCTTTGC CCCGGCACGC AACCAGGCAC TGTGGCAGGA GGCCCTGTAC GCGCAAGTGG CGCGCCTGAC ACCGGCAGGC GGAACACTCG CCAGCTTCAC CGCCGCAGGC CACGTGCGTC GCGGCCTGGA GACCACGGGT TTTGCCATTG AGCGCCTGCC GGGTTTCGGC CACAAGCGGG AACGCATCCG CGGCCTGAGA AACACACAGG CAGCGACCCC CGACCCCACC CCGCCCTGGT ACTCGAACCC GCCCCCCGCC CCACCCGCCG CACGCCAGGC GGCGGTACTC GGCGCAGGCC TTGCCGGCAG CGCCGTGGCC CTGGCCCTGG CGCGCCGGGG CTGGCAGGTC ACGGTGGTGG ATGGCGCGGA TCAGGTGGCC GCCGGCGCCT CCGGCAACCC GGCCGGCATC CTCATGCCGC ACCTGAGCGC CGATCACGGG GTGGTGAGCC GCTTCACCCT GTCGGCGGCG GCGTTTTCCC GCCAGTGGAT CGAATCCCTG GGACTGACCC CGGAGGCCCT GCCCCGTGAC TGGTGCGGCG CCCTGTGGCT GGCCGACGGC AAGCGCCTTG CGCAGCGCCT GGAACGCATC CGTGAACGCC TGACCCTGCC CCCGGAACTG ATGCGGGCCG TGGATGCCGC CGAGGCCAGC GAGCTGGCCG GCGTGCCACT CAACCTGCCG GGCCTGTTCC TGCCCCGGGC AGGCTGGGTG GACCCGGCGG CCCTGTGCCG CGCGCAACTG GCAGCGGCGG GTGTGAATCT GCGCCTGGGA CGAGCGGTGT CACGCCTCAC CCGTGACGGA CAAGACTGGC TGCTGGAAGA TGAGCATGGC GTGGCGATCA CACGCGCACC CCGGGTGGTG CTGGCCAACG GCGCGGGCCT GCCGGGGCTG CATCCGGGCA TCGAACCCAG GCCCCTGCGC GGTCAGCTGA GTGTGATTGA AACAAGCCGC AACACGCGGG GGCTGAAGAG GGTGCTGTGC TACGAGGGCT ACCTGACACC GGCAACCCGA AGCGGCCATG TCTGCGGCGC GAGTTTCGTG CGTGGTGACC GGAACACCCG GCTGCGTCCC GAGGAACATG CCAGCAACCT GGCGGGACTG CGCCGGGTCT GGCCGGACGC GCTGGGGGAT GAGGACCCGC CCCTGTCCGG ACGGGCGGCG CTGCGCTTCA ACGCCCCGGG CCGCCTACCG CTCGCGGGGC CGCTGCCGGA CATGGTGGCC TTCGAACGCT GCTACGGGGA ACTGCATCAC GGCCGTCGCC CCGACAGTTA TCCCGGGGCG CCCCTGCTGC CCGGCGTCTA CACCAGCCTG GCCCATGGCT CGCGGGGCCT GACCACCGCC CCCCTGAGCG CCGAACTGCT GGCCTCGCTG ATGCACGGCG ATCCCCTGCC CCTGCCCCGT GACCTGGTGG AGGCCCTGCA TCCGGCGCGG GATCGGGTCA GGGAACTCAG GAAAGCGCAT TCCTGA
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Protein sequence | MASATDTGAG FQPLEPAVLE FRDGTPWSSR YGDVYFSHGH GAEESRTVFL EANGLPERWL DRDVFTIAET GFGTGLNFLL TWDLWRGQPG AGWLHYLSVE LHPFTREDLA RLISTLPRAL RDLGEALLAQ YPAPVPGFHR LLFPGERLSL TLMFGDAVDC LSQCQAQVDA WYLDGFAPAR NQALWQEALY AQVARLTPAG GTLASFTAAG HVRRGLETTG FAIERLPGFG HKRERIRGLR NTQAATPDPT PPWYSNPPPA PPAARQAAVL GAGLAGSAVA LALARRGWQV TVVDGADQVA AGASGNPAGI LMPHLSADHG VVSRFTLSAA AFSRQWIESL GLTPEALPRD WCGALWLADG KRLAQRLERI RERLTLPPEL MRAVDAAEAS ELAGVPLNLP GLFLPRAGWV DPAALCRAQL AAAGVNLRLG RAVSRLTRDG QDWLLEDEHG VAITRAPRVV LANGAGLPGL HPGIEPRPLR GQLSVIETSR NTRGLKRVLC YEGYLTPATR SGHVCGASFV RGDRNTRLRP EEHASNLAGL RRVWPDALGD EDPPLSGRAA LRFNAPGRLP LAGPLPDMVA FERCYGELHH GRRPDSYPGA PLLPGVYTSL AHGSRGLTTA PLSAELLASL MHGDPLPLPR DLVEALHPAR DRVRELRKAH S
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