| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1847 |
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| Symbol | |
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| ID | 7315177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1960785 |
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| End bp | 1962731 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643616738 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002513915 |
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| Protein GI | 220935016 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATACA ACATGGCCGA GAACGGCAAT CACCCACTGC CGGAAATGGA GTTCCTCAAG
CGCAGGGTCG AATACCTGGA ACAGACCACC CAGTGGCACA GCTACGCCAT GGACGTGCTT
GCGTCCATGA CCGCGATATT CGGTGACAGC GCGCGCAACC GCGACACCGC CTCAATCCTC
AAGAACGCCC ACGAATGCAT CGACCGGATC CTGGATTTCC AGCAGACCGG TTATTACATC
GTCGACGACG AATCCAGCTT CAACCTGGTC TATGCCCCGT CCCAGGAGGA CAAGACCAGC
ATCGAGGCCG AGGTGGAGGT CTTCATCCGC AACGGCATGT TCTCCTGGGC CATCAACCAG
AATCACCCGG TGTGCCTGCC TTCCCGGGAT CGCCAGTCCA CCATCATCCT GCACGTGATC
TCCACCCGCA CCCGCATCCG CGGCATGTTC GCCGGGCGTC TGGGCGAGGA AAGGGTGGGC
ACCACGGAGT CGGCGCTCAA GCTGCTGTCG ATCGTGCTGT TCAATACCGC CTACGCCCTG
GAGAGCGCGG CACTGTACGC CCTCATGGAG CAGCAGCAGC GCACGCTCAA GAAGATCACC
GAACGCCAGT CCAAGGAACT GGTGCACCAG TACAGCCACG ACCTGCTCAC CAACCTGCCC
AACCGCATCC TGTTCGTGGA CCGACTGGAG CAGAGCATCG GCCGGCGCGC CAGCCGCGAT
GCACACCTGG CGGTGATCCT GCTGGACCTG GACAACTTCA AGCGAGTCAA CGATTCGCTA
GGCCACAAGA GCGGCGACCT GCTGATCAAG CAGCTGGGCG AAGACCTGCG CAAGGTATTC
CTGGGCAACG AGCTGGCGCG ACGCTACGGC ATCGAGGCCT CCAGCATCAC CCTCTCCCGC
CTCGGCGGTG ACGAGTTCGG CATCATCCTG GACGAAGTGG ATTCACTGGA CCTGGTGGTG
CGCATCGTGC AGCACCTGAT CGAGGTGATC AGCCGGGAAC ACGACATCGA GGGACACCAG
GTGTTTCTCA CCTGCAGCGT GGGCATCAGC GTGTTCCCCT ACGACGGCGA CGACGCCGAC
ACCCTGATCA AGAACGCCGA CGCGGCCATG TACGACGCCA AGCAGCGCGG GCGCAACAGC
TTCCAGTTCT ACACCAAGGA CATCAACTCC CAGACCTACC GCCAGCTGAT CCTGGAAAAC
CAGCTGGTCA AGGCCCTGGC CCGGGAGGAG TTCGAGGTGC ATTACCAGCC CCAGGTGGAC
GTGATCTCCG GGCAGGTGGT GGGCGCCGAG GCCCTGGTGC GCTGGCGGCA CCCGGAGAAG
GGCCTGCAGC CGCCGGCCAA CTTCATCGCC ATCGCCGAGG AGACCGGCAT CATCGAAGGA
CTGGGCGCCT GGGTGCTGCA GAAGGTCTGT CAGGACATCC GGCAACTCAC CCGGGACGGA
TACCGGATCC CGCGCATCTC CATCAACCTC TCGGCGCGCC AGTTCCGCCA GTCCGACCTG
GTGGAGCAAT GCCGCAACAC CATCAGGTCC GCGGGTATCG CCCCCGCCTA CATCGAGCTG
GAGCTGACCG AAAGCACCAT CATGAAGGAC ATCGACATCG CCGTGGGCAT GCTGCGCCAG
CTCAACGCAC TGGGTGTGCG CCTGGCCATC GATGATTTCG GCACCGGCTA TTCATCGCTC
AACAACCTCA AGCACTTCCC CATCGACACC CTGAAGATCG ACAAGTCCTT CGTGCGCGAC
ATCCCCGGCG ACCGGGACGA CGAGGCCATC GTCACCGCCA TCGTGGCCCT GGCCAAGAGC
CTGGAACTGG AGGTGGTGGC CGAAGGCGTG GAGACCCGGG AACAGCTCGG CTTCCTCAAA
CGACTGGGAT GCGAGATCGT GCAGGGCTAC TTCTTCAGCA GGCCGCTGCC GTTTGAAGGG
TTCAGGGAAT ACCTTAAAGG CAAGTAA
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| Protein sequence | MPYNMAENGN HPLPEMEFLK RRVEYLEQTT QWHSYAMDVL ASMTAIFGDS ARNRDTASIL
KNAHECIDRI LDFQQTGYYI VDDESSFNLV YAPSQEDKTS IEAEVEVFIR NGMFSWAINQ
NHPVCLPSRD RQSTIILHVI STRTRIRGMF AGRLGEERVG TTESALKLLS IVLFNTAYAL
ESAALYALME QQQRTLKKIT ERQSKELVHQ YSHDLLTNLP NRILFVDRLE QSIGRRASRD
AHLAVILLDL DNFKRVNDSL GHKSGDLLIK QLGEDLRKVF LGNELARRYG IEASSITLSR
LGGDEFGIIL DEVDSLDLVV RIVQHLIEVI SREHDIEGHQ VFLTCSVGIS VFPYDGDDAD
TLIKNADAAM YDAKQRGRNS FQFYTKDINS QTYRQLILEN QLVKALAREE FEVHYQPQVD
VISGQVVGAE ALVRWRHPEK GLQPPANFIA IAEETGIIEG LGAWVLQKVC QDIRQLTRDG
YRIPRISINL SARQFRQSDL VEQCRNTIRS AGIAPAYIEL ELTESTIMKD IDIAVGMLRQ
LNALGVRLAI DDFGTGYSSL NNLKHFPIDT LKIDKSFVRD IPGDRDDEAI VTAIVALAKS
LELEVVAEGV ETREQLGFLK RLGCEIVQGY FFSRPLPFEG FREYLKGK
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