| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1775 |
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| Symbol | |
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| ID | 7317585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1886648 |
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| End bp | 1889773 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643616667 |
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| Product | type I restriction-modification system restriction subunit |
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| Protein accession | YP_002513844 |
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| Protein GI | 220934945 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCGA TCGGACAGCC TGAACGCGTG ACCCAGAACC GGGTCGTCCA GCTCTTTCGC
GATGAGCTGG GCTACGACTA CCTGGGCGAC TGGGGCGAGC GCGAGGGCAA CAGCAACATC
GAGGAGGGGC TGCTGACGCA GTGGCTCGCC GGGCGGGGTT ACAGCCAGGC CCAGATCTCC
CGTGCCATCC ACAAGCTGCG CGCCGAGGCG AACGATCACG GGCGCGAGCT CTACGAGAAC
AACAAGCACA TCTACGGCCT GCTGCGCTAC GGCGTGGCGG TGAAGACCGA GGCGGGGCAG
CACACGCACA CGGTGCACCT GATCGACTGG CAGTCCCCGC AGAATAACCA CTTCGCCATT
GCCGAGGAGG TTACCCTCAA GGGCAAGCTG GAACGGCGTC CCGATCTGGT GTTGTACGTG
AACGGCATCG CAGTGGGTGT GCTGGAACTC AAGAACAGCC GGGTGTCCCT CGGCGACGGC
ATCCGCCAGA GCCTGTCCAA CCAGCAGCCC GAATTCAACG CCTGGTTCTT CAGCACCGTG
CAGTTCATCT TCGCGGGCAA CGATTCCGAG GGGCTGCAAT ACGGCACCAT CGGCACGCCG
GAGAAGTTCT TCCTCAAGTG GAAGGAGGAC GAGGCGGACA ACAGCCGCTA CAAGCTGGAC
AAGTACCTGC TCAAGATGTG CGACAAGCAG CGCCTGATCG AGCTGATGCA CGATTTCGTG
CTGTTCGACG GGGGCGTGAA GAAACTGCCC CGGGTGCATC AGTACTTCGG CATCAAGGCG
GCGCAGACAT ACGTGCGCCG GGGCGAGGGC GGCATCATCT GGAACACCCA GGGCAGCGGC
AAGAGCATCG TCATGGTGCT GCTGGCCAAG TGGATCCTGG AGAACAACCC CGATGCCCGG
GTGGTGGTGA TCACCGACCG GGACGAGCTG GACGCCCAGA TCGAGCGGGT CTTCCGGGAC
GCGGGGGAGA GCATCTACCG CACCAGCAGC GGGCGTGACC TGGTGAACCA ACTGGGCCAG
GCCAGGCCCA GGCTGTTGTG CTCTCTGGTG CACAAGTTCG GCGCCCGGGG CGTGGAGGAC
TTCGACGCCT TCATCCGCGA GCTGAAAGCG CAGCCCAGCC CCACGGTGGG CGAGGTATTC
GTGTTCGTGG ACGAATGCCA CCGCACCCAG GGCGGCAAGC TGAACCAGGT GATGAAGGCC
ATGATGCCCG ACGCGGTGTT CATCGGCTTC ACCGGCACGC CGCTGCTGAA GCGGGACAAG
GCCACCAGTC TGGAGGTCTT TGGCGGCTAC ATCCACACCT ACAAGTTCAG CGAGGCGGTG
GAGGACCAGG TGGTCCTGGA TCTGGTCTAC GAGGCCCGGG ATATCGACCA GAAGCTTGGC
TCCCAGGCCA AGATCGACGA ATGGTTTGCC GCCAAGACCA AGGGTCTGAA CCCGTGGCAG
CGGGATGAGC TGATGAAGAA GTGGGGCACC ATGCAGCAGG TGCTTAGCTC CAAGTCCCGT
ATGAGCCGGG TGGTGGCCGA CATCCTGTTC GATTTCGGCG TGAAGCCACG GCTGTCCAGC
GAGCGGGGCA ACGCCATCCT GGTGGCCTCC AGCATCTACG AGGCCTGCAA GTACTTCTCC
CTGTTTCAGC AGACCAGCCT CAAGGGCAAG TGCGCGGTGG TGACCTCCTA CAACCCCATG
GCCAATCACG TGACCCTGGA GGAGACCGGC GCCAACACCG AGTCCGACAA GCAGTTCATC
TACAGCATGT ACACGGAACT GCTCAAGGAC GTGGACGCCC AGCCGGGCAA GACGAAGACC
GAGACCTACG AGGCCTGGGC CAAGGACCGG TTCACCCGGG AACCGGCCAA CATGAAGCTG
CTGGTGGTGG TGGACAAGCT GCTGACCGGC TTCGACGCGC CCCCCTGCAC CTATCTCTAC
ATCGACAAGT CCATGCAGGA CCACGGCCTG TTCCAGGCCA TCTGCCGCAC CAACCGCCTG
GACGGCGAGG ACAAGGACTT CGGCTACATC GTCGATTACA AAGACCTGTT CAAGAAGGTG
GAGAACGCCA TCGCCGTGTA CAGCTCCGAG CTGGACCACA GCGCCCCCGG CGCCGATCCC
GAGGTGATGA TCCAGGACCG CCTCACCAGG GGCCGGGAAA AGCTGGACGA GGCCCTGGAG
GCCCTGGTCC TGCTGTGCGA GCCGGTGGAG CCCCCCAGGG GCGAGCTGGA GCACATCCAT
TACTTCTGCG GCAACACCGA GATCCCCGAA GACCTGGCCG AGCGCGTGCC GCTGAGAACG
GCCCTCTACA AGGGTGTCGC CACCCTGATG CGCACCTATG CCGGGCTTGC CGACGAGATG
GAGCCCGCGG GTTACTCGGC CAAGGAGGCA GCAGAGATCA AGCGCAGGCT GGAGGATTAT
CTCAAGCTAC GGGACATCAT CCGCAACGCC AGCGGCGAGA CCCTGGACCT GAAGGCCTAC
GAGGCCGACA TGCGGCACCT GATCGACACC TACATCGAGG CGGACGAACC CCGCAAGATC
TCCGCCTTCG AGAACATCGG CCTGCTGGAC CTGATCGTGA AGACCGGCGT CGCCGACGCC
ATCAATCAGC AGCTCGGCAA CCTGAAGGGC AGCAGGGACG CCATCGCCGA GACCATCGAG
AACAACGTCC GCAGCAAGAT CCTCAAGGAA CACCTGACCG ACCCGGCCTA CTTCGAGAAG
ATGTCCGCCC TGCTCGCCGA GATCATCGAG GCCCGCAAGG CCAAGGCCCT GGAGTACGAG
GAATACCTCA GGCAGATCGC CGAGCTGGTG AAGAAGGTGG CCGAAGGCAA GGATGAGGAC
GTCCCGCCCG CGCTGGATAC ACCGGGCAAG CGGGCGCTGT ACAACAACCT GATGCTGCGG
GTGCCTGCGG CTCAGCCAGC GGGGCAGGTG TTGGAGGTCA GGCCGAGCTG CCCGGAACTG
ACCCAGGAGG AGGCCCTGGA GCTGGCCCTG AAGCTGGATG AGGTGGTGCG ACAAGTCAGG
CCGGACGGCT GGCGCGGTTT ACAGCCACGG GAGAACACCA TCAAGCGCGC GCTCTATGAG
GTGCTTAAGG ATCCCGATGA GGTGGATCGG CTGTTCAGCA TCATCAAGGC CCAGGCGGAG
TATTGA
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| Protein sequence | MSSIGQPERV TQNRVVQLFR DELGYDYLGD WGEREGNSNI EEGLLTQWLA GRGYSQAQIS
RAIHKLRAEA NDHGRELYEN NKHIYGLLRY GVAVKTEAGQ HTHTVHLIDW QSPQNNHFAI
AEEVTLKGKL ERRPDLVLYV NGIAVGVLEL KNSRVSLGDG IRQSLSNQQP EFNAWFFSTV
QFIFAGNDSE GLQYGTIGTP EKFFLKWKED EADNSRYKLD KYLLKMCDKQ RLIELMHDFV
LFDGGVKKLP RVHQYFGIKA AQTYVRRGEG GIIWNTQGSG KSIVMVLLAK WILENNPDAR
VVVITDRDEL DAQIERVFRD AGESIYRTSS GRDLVNQLGQ ARPRLLCSLV HKFGARGVED
FDAFIRELKA QPSPTVGEVF VFVDECHRTQ GGKLNQVMKA MMPDAVFIGF TGTPLLKRDK
ATSLEVFGGY IHTYKFSEAV EDQVVLDLVY EARDIDQKLG SQAKIDEWFA AKTKGLNPWQ
RDELMKKWGT MQQVLSSKSR MSRVVADILF DFGVKPRLSS ERGNAILVAS SIYEACKYFS
LFQQTSLKGK CAVVTSYNPM ANHVTLEETG ANTESDKQFI YSMYTELLKD VDAQPGKTKT
ETYEAWAKDR FTREPANMKL LVVVDKLLTG FDAPPCTYLY IDKSMQDHGL FQAICRTNRL
DGEDKDFGYI VDYKDLFKKV ENAIAVYSSE LDHSAPGADP EVMIQDRLTR GREKLDEALE
ALVLLCEPVE PPRGELEHIH YFCGNTEIPE DLAERVPLRT ALYKGVATLM RTYAGLADEM
EPAGYSAKEA AEIKRRLEDY LKLRDIIRNA SGETLDLKAY EADMRHLIDT YIEADEPRKI
SAFENIGLLD LIVKTGVADA INQQLGNLKG SRDAIAETIE NNVRSKILKE HLTDPAYFEK
MSALLAEIIE ARKAKALEYE EYLRQIAELV KKVAEGKDED VPPALDTPGK RALYNNLMLR
VPAAQPAGQV LEVRPSCPEL TQEEALELAL KLDEVVRQVR PDGWRGLQPR ENTIKRALYE
VLKDPDEVDR LFSIIKAQAE Y
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