Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1720 |
Symbol | |
ID | 7315742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | - |
Start bp | 1816666 |
End bp | 1817871 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643616611 |
Product | hypothetical protein |
Protein accession | YP_002513789 |
Protein GI | 220934890 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0138813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCATT TCCGGGCATG CATCGCCAGG CTCCTAGAGG GTTTACACTC CTATCACCTG ACCCTTCACA CCTCACCCGA CCTGGCCTGC ACCCCTATGC ACCCCGAATT CCCCCTCGAA CCTGGCCTGA TCCACCTGAA CCACGCCGCC GTGGGCCCCT GGCCCCGGCG CACGGCGGAG GCGGTGCACC GCTTTGCCGA GGCCAACCTG CGCGCCGGTT CCCGGGACTA CCCCGCGTGG ACCCGGGAGG AAACCCGCCT GCGGGGGCTG CTGGCACGGC TGATCAACGC CCCCTCCCCA GAAGACATCG CCCTGCTCAA GAACACCTCC GAGGCCCTGT CTGTGGTGGC CTACGGCCTG GACTGGGTGC GGGGCGACAA CGTGGTGTTC CCCCGGGAGG AGTTCCCGTC CAACCGCCTG GTCTGGGAGT CCCTGGAGCC CCGGTTTGGC GTCGAGGCCC GGCGGGTGGA TCTCGCCGGC GCGGTGGACC CGGAGGCTGC ATTGATCGAG GCCATGGATG CCAACACCCG GCTGTTGTCG GTGAGCGCCG TGCAGTACGC CAGCGGCCTG CGCCTGGACC TGGAACGCCT GGGGGCGGCC TGCCGTAAGC GGGACGTGCT GTTCTGCGTG GACGCCATCC AGCAGCTGGG CGCCCTGCCC TTCGATGCCC AGGCCTGCCA TGCGGACTTC GTGGCAGCCG ACGGGCACAA GTGGATGCTG GGCCCGGAAG GTCTGGCGGT GTTCTACGTG CGCGCCGGAA TCCGCGACTG GCTGAAGCTC AATCAGTTCG GCTGGCACAT GGTGGAGGCC CTCGGGGATT ACGACCGCAC TGACTGGGAA CCGGCCGCCT CGGCCCGGCG CTTCGAGTGC GGCAGCCCCA ACATGCTGGC CATCCACGCC CTGGCGGCGA GCCTGGACCT GCTGCTGGAG ACAGGGCTTG AGAATATAGC TGAGAGTATT TCTGGAAAGA TATCTTATCT TATTGATTCA CTTGAATCAA AAGGCTTCGA TATCCTCACG CCAAAGGCCG CGGCTCGGCG TGCCGGCATC CTCACCTTCC GTCGCCCTGG TCAGGACATG GCGGCCCTGC ATCAGCGCCT CATGGCCGCC GGGGTGCTGT GCGCCCATCG GGGCGGCGGG GTGCGTTTCA GCCCGCATTT CTACACTCCG CAAGCGGATC TCGACGCGGC CCTGGATCTC CTGTAA
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Protein sequence | MPHFRACIAR LLEGLHSYHL TLHTSPDLAC TPMHPEFPLE PGLIHLNHAA VGPWPRRTAE AVHRFAEANL RAGSRDYPAW TREETRLRGL LARLINAPSP EDIALLKNTS EALSVVAYGL DWVRGDNVVF PREEFPSNRL VWESLEPRFG VEARRVDLAG AVDPEAALIE AMDANTRLLS VSAVQYASGL RLDLERLGAA CRKRDVLFCV DAIQQLGALP FDAQACHADF VAADGHKWML GPEGLAVFYV RAGIRDWLKL NQFGWHMVEA LGDYDRTDWE PAASARRFEC GSPNMLAIHA LAASLDLLLE TGLENIAESI SGKISYLIDS LESKGFDILT PKAAARRAGI LTFRRPGQDM AALHQRLMAA GVLCAHRGGG VRFSPHFYTP QADLDAALDL L
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