| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1712 |
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| Symbol | |
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| ID | 7315734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1811008 |
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| End bp | 1811574 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643616603 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002513781 |
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| Protein GI | 220934882 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACCGGT TATACGGCAC GGCGCTCAGG CTGACGGGCA ATCCGGACGA CGCGCAGGAC
GTGGTCGCGG AGGCGGTTAG CAAGGCGTGG TCAAAGCTGG ACGACCTGCG TGACCTCGAG
TCCATGGAAG GGTGGCTGTT CCGAATTCTT AACAACGCGT TCGTCAGCCA GTGGCGGCGT
CGAAGGACCC GCGACGAGGT GGAGCGCGAA GCCGTGGAGA CCTCCGACGC GGGGGATTTC
TCCCTTTTCC AGCAGTTGCA CCAGCCGTTC CTGCTCTGGT GGGGCACGCC GGAGCAGCAG
TTTCTCAATG ATGTGCTGCA GGAGGACCTG CAGAAGGCGC TGGATGCATT GCCGGACGGT
TTTCGCGTGG CGATCGTCCT GGTGGAGGTT CAGGGTTACA CCTACGAGGA GGTTTCCGCA
TTGCTTGAGA TACCGGTTGG CACCGTGCGG TCCCGCCTGA GCAGGGGGCG AGCGCTGCTG
CAGAAGGCGC TCTGGCAGCA GGCCTCCGAG GCCGGCCTGG TTCATGGTCG CCACCCCTCC
GACAGCGGCG CCGGAGATTC GACATGA
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| Protein sequence | MDRLYGTALR LTGNPDDAQD VVAEAVSKAW SKLDDLRDLE SMEGWLFRIL NNAFVSQWRR
RRTRDEVERE AVETSDAGDF SLFQQLHQPF LLWWGTPEQQ FLNDVLQEDL QKALDALPDG
FRVAIVLVEV QGYTYEEVSA LLEIPVGTVR SRLSRGRALL QKALWQQASE AGLVHGRHPS
DSGAGDST
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