Gene Tgr7_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1702 
Symbol 
ID7315724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1803326 
End bp1803982 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID643616594 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002513772 
Protein GI220934873 
COG category[K] Transcription 
COG ID[COG1395] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACCC GCAAGGCGAA ACCCAAGGCG GCCGGGAAGG CCGCGCGGCC TGCAGCGCCC 
GAACCCGCAG CGCACGCGGA GGACCGCAAC CTGGACCAGC ACATCGGCCA CGTGCTGCGG 
GAAAAACGCC AGGCCCAGTC GCTCACCATC GCCGACGTGG CCGATCTCGC CGGCGTGAGC 
CGGGGCATGC TCTCCAAGAT CGAGAACGGC CAGGTCTCCA CCAGCCTGGA GACCCTGCGC 
AAGCTGTCGG GTGTGCTGGG CATGACCCTG GCCCAGCTGT TCAAGAACTT CGACGTCCCC 
GAGGGCGGCG CCCAGCACGT GAAGAGCGGC GAGGGCCTGG AAGTGGTGCG CCGCGGCACC 
CGCCGAGGTC ATACCTATCA CCTGCTCGCC TACGACCAGG GCCCCCGCAA GCAGGTGGAG 
CCCTTCCTCA TCACCATGGA CGACGCCAGC GAGGTGTTCC CCACCTTCAC CCATCCGGGC 
ACCGAGTTCA TCTACATGCT CGAAGGCCGC ATCGAATACC GCCACGGCCG CAACACCTAT 
CTCCTGGAGC CCGGCGACTC CCTCACCTTC AAGGGCAGCA TCCCCCACGG CCCCGAGCGA 
CTCCTGGAAG TCCCGATCCG CTTCCTGGCG GTGATCAACT ATGGGGACGA AGAGTGA
 
Protein sequence
MATRKAKPKA AGKAARPAAP EPAAHAEDRN LDQHIGHVLR EKRQAQSLTI ADVADLAGVS 
RGMLSKIENG QVSTSLETLR KLSGVLGMTL AQLFKNFDVP EGGAQHVKSG EGLEVVRRGT 
RRGHTYHLLA YDQGPRKQVE PFLITMDDAS EVFPTFTHPG TEFIYMLEGR IEYRHGRNTY 
LLEPGDSLTF KGSIPHGPER LLEVPIRFLA VINYGDEE