| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1698 |
|---|
| Symbol | |
|---|
| ID | 7315720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | + |
|---|
| Start bp | 1799025 |
|---|
| End bp | 1800359 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643616590 |
|---|
| Product | glutamine synthetase, type III |
|---|
| Protein accession | YP_002513768 |
|---|
| Protein GI | 220934869 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I
[TIGR03105] glutamine synthetase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.738423 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAC AGGAAGCGAA GACCTATCTG GAGAGTCACC AGGTCAAGTA CATCCTGGCC
CAGTTCGTGG ACATCCACGG CGTGGCCAAG ACCAAGTCCG TGCCCGTCAG TCACCTGGAG
GACGTGCTCA CCGACGGCGC CGGTTTCGCC GGCTTCGCCG TGTGGGGCCT GCGCATGGGT
CCCCACGAGG CGGACTACAT GGCCCGGGGC GATCTCAGCA CCCTGTCCAT CGTGCCCTGG
CAGCCCGGCT ATGCGCGCAT CGTCTGCGAC GGCTACGTCA ACGGCGAGCC CTACATGCTG
GACACCCGCA ACATCCTCGC CGCCCAGGTG AAGCGCCTCA AGGAGCGCGG CTGGACCATG
AACACCGGGC TCGAGCCCGA GTTCAGCCTG CTGCGCCGCG ACGGCAACGG CTGCGTCGTC
CCCGCCGACG ATTCCGACCG GCTCGACAAG CCCTGCTACG ACTACAAGGG GCTGTCCCGT
TCCCGTGAGT TCCTGGAGCG CCTGGTGGAG TCCCTGCAGG CGGTGAACTT CGATGTCTAC
CAGGTGGACC ACGAGGACGC CAATGGCCAG TTCGAGATCA ACTACACCTA CTCGGACTGC
ATGACCTCCG CGGACCGCTA CGTGTTCTTC CGCATGGCCG CCGGCGAGAT CGCCAACCAG
CTGGGACTCA TCTGCTCCTT CATGCCCAAG CCCTTCTCCA ACCGCACGGG CAACGGCATG
CACATGCACA TCTCCATCGC CGATGAATCC AATCCCAACA TCTTCCAGGA CCCGTCGGAC
CCCCGCGGCC TGGAACTCTC CAAGACCGCC TATCACTTCG CAGCGGGCCT GCTGGCCCAC
GCCCCGGCGC TGACCGCGCT CCTGGCGCCG AGTGTGAACT CCTACAAGCG CCTGGTGGTG
GGCCGCGCAC TGTCCGGTTC CACCTGGGCC CCGGCCTTCA TCTCCTACGG CGACAACAAC
CGCACCTCCA TGGTGCGCAT CCCCAAGGGC CGCCTGGAGC TGCGCCTGGG CGACGGTGCC
TGCAACCCGT ACCTGGCCGC CGCCGCGGTG ATCGCCGCCG GTCTCGATGG CGTGGACCGC
AAGCTGGAGC CGGGCGAACC GCAGAACTTC AACTTCTATG ACCTGAGCCC CGTGGAGCTG
GCGGAGAAGG GCATCAAGAC CCTGCCCCAG AGCCTGCACG AGGCCATCGC CGCGCTGCAG
AAGGATGCGC TGTTCGCCGA ACAGCTGGGC CAGGACTTCA TCGAAGAGTT CATCCGGCTG
AAGAACATGG AATGGGTGGA ATACTCCCGC CATGTGTCCG ACTGGGAACT CAACCGTTAC
GTGGAATTTT ACTGA
|
|---|
| Protein sequence | MTPQEAKTYL ESHQVKYILA QFVDIHGVAK TKSVPVSHLE DVLTDGAGFA GFAVWGLRMG
PHEADYMARG DLSTLSIVPW QPGYARIVCD GYVNGEPYML DTRNILAAQV KRLKERGWTM
NTGLEPEFSL LRRDGNGCVV PADDSDRLDK PCYDYKGLSR SREFLERLVE SLQAVNFDVY
QVDHEDANGQ FEINYTYSDC MTSADRYVFF RMAAGEIANQ LGLICSFMPK PFSNRTGNGM
HMHISIADES NPNIFQDPSD PRGLELSKTA YHFAAGLLAH APALTALLAP SVNSYKRLVV
GRALSGSTWA PAFISYGDNN RTSMVRIPKG RLELRLGDGA CNPYLAAAAV IAAGLDGVDR
KLEPGEPQNF NFYDLSPVEL AEKGIKTLPQ SLHEAIAALQ KDALFAEQLG QDFIEEFIRL
KNMEWVEYSR HVSDWELNRY VEFY
|
|---|
| |