Gene Tgr7_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1619 
Symbol 
ID7316932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand- 
Start bp1737195 
End bp1737812 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content67% 
IMG OID643616511 
Producttail fiber-related protein 
Protein accessionYP_002513689 
Protein GI220934790 
COG category[R] General function prediction only 
COG ID[COG5301] Phage-related tail fibre protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0820088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGCG ATTTCTATAC GGTCCTGACG GCGATCGGGA TGCAAAAGCA GGCGGCCTAT 
CAGGCCGGTG GGCCGCGCGT GGAGCTGGCG ACGGTGCATG CCGGCACCGG GGGCGGCGAC 
AGTTACTACG AGCAGTACGA CCGCGAGGCG CTGGAGGGCC TCGAGGCGCT GGTGGATGAG 
GTGTGGTCGG CGCCGATCAA TCATCTGGCG GTGGATGACG CGAACCCTAA CTGGGTGGTG 
ATCGAGGGGG TGATTCCGAC CGATGCGGGT GGCTGGATGA TCCGCGAGGT GGGCGTGAAG 
GATGCCGAGG GCGACCTGAT CGCCGTGGGG CGCTTCCCGC CGACCTACAA GCCTAGCCTG 
GACGATGGGG CGGCGCAGGA TCTGCTGATC CGCTCCATCA CCGAGTGGGG TAACGCCGAG 
GCGGTAACCC TTGAGGTAGA CCCGGCGGTG GCACTGGCCT CGCGCGGCTA CGCCGAGACG 
GTGGCCGCCG AGGCGCTGGA GGCCGCGCAG GACTATACCG ACGAGCGCAT CGATCCAGTG 
GACCGGCAAA CCGGCACGCC CTATCGGGTC GTGGTGGTGG ACGGCGTGCT GTGTATCGAA 
GACATGACCG AGGAGTGA
 
Protein sequence
MAGDFYTVLT AIGMQKQAAY QAGGPRVELA TVHAGTGGGD SYYEQYDREA LEGLEALVDE 
VWSAPINHLA VDDANPNWVV IEGVIPTDAG GWMIREVGVK DAEGDLIAVG RFPPTYKPSL 
DDGAAQDLLI RSITEWGNAE AVTLEVDPAV ALASRGYAET VAAEALEAAQ DYTDERIDPV 
DRQTGTPYRV VVVDGVLCIE DMTEE