Gene Tgr7_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1560 
Symbol 
ID7316184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1674776 
End bp1675438 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID643616451 
Productriboflavin synthase, alpha subunit 
Protein accessionYP_002513631 
Protein GI220934732 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCACAG GCATCATCCA GGCGGTCGGC GAGGTGGCGG GCATCGAGCC CAGGGGCGGC 
GACTGCCGGC TGCGCATTCG CACCGGCAAG CTGGACCTCT CCGATGTGCA ACTGGGCGAC 
AGCATCGCCG TGAACGGCGT GTGCCTGACC GCCGTCGAAC TGCCTGGGGA TGGATTCGTG 
GCCGATGTCT CCGGGGAGAC CCTGTCGCTC ACCAGCCTGG GCGCACTGGG CAAGGGCAGT 
GCCGTGAACC TGGAGAAGGC CCTGACGCCC ACCACGCGCC TGGGCGGGCA CCTGGTGAGC 
GGTCACGTGG ACGGACTGGG CGAGGTGCTG TCCCTGAAGG ACGACGGCCG CTCCGTGCGC 
TACGAGATCC GCGCCCCGGC AGGCCTCGCA CGCTACATCG CGCCCAAGGG CTCCATCTGC 
ATGGATGGCG TGAGCCTCAC CGTCAACCGG GTGGATGGTG CGGTGTTCTC CGTGAACATC 
GTGCCCCACA CCCAGCAGGA GACCACCATC CGCTTCTACC GGGCCGGCAC CCGGGTGAAC 
CTGGAGGTGG ACCTGATCGC CCGCTACCTG GAACGCCTGC TGCTGGGCGA GAAGGCCGCC 
GAGTCCGGCA GCGGACTGAC CGAGGCCTTC CTGGCGGAAC ACGGATTTCT TGGAAAGAAA 
TGA
 
Protein sequence
MFTGIIQAVG EVAGIEPRGG DCRLRIRTGK LDLSDVQLGD SIAVNGVCLT AVELPGDGFV 
ADVSGETLSL TSLGALGKGS AVNLEKALTP TTRLGGHLVS GHVDGLGEVL SLKDDGRSVR 
YEIRAPAGLA RYIAPKGSIC MDGVSLTVNR VDGAVFSVNI VPHTQQETTI RFYRAGTRVN 
LEVDLIARYL ERLLLGEKAA ESGSGLTEAF LAEHGFLGKK