| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1467 |
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| Symbol | |
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| ID | 7317078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1569909 |
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| End bp | 1571672 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643616358 |
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| Product | succinate dehydrogenase, flavoprotein subunit |
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| Protein accession | YP_002513538 |
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| Protein GI | 220934639 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.38125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGTAA CGGTTCGCAA GTTCGACGCA CTCATCATCG GCGCCGGCGG CGCCGGCCTG
CGCGCGGCCC TGCAGCTGGC CAACGCCGAG GCCAGCGTGG CGGTGGTCTC CAAGGTCTTT
CCCACCCGCT CCCACACCGT GGCGGCCCAG GGGGGCGTGA ATGCCGCCCT GGCCAACGTG
CTGCCGGACA GCTGGCACTG GCACATGTAC GACACGGTCA AGGGCAGCGA CTGGCTGGGC
GACCAGGACG CCATCGAGTA CATGTGCCGG GCGGCACCCA AGGTGGTCTA CGAGCTGGAG
CACTTCGGCG TGCCGTTCTC GCGCCTGGAC AACGGCAACA TCTACCAGCG GGCCTTCGGC
GGCCAGAGCC AGCACTTCGG AAAGGAGCAG GCGGCACGCA CCTGCGCGGC TGCGGACCGC
ACCGGCCACG CCATCCTGCA CAGCCTCTAC CAGCAGAATA TCCGCGCCAA GACCCATTTT
TTCGACGAAT ACTTTGCCGT GGACCTGCTC AAGGACGAGG AGGGCTATGT GCTCGGCGCG
CTGGCCTTCG AGATCCTCAC CGGCGAGCCC ATCGTCATCG AGGCCAAGAC CACGCTGCTG
GCCACCGGCG GCGTGGGCCA GCTGTTCCGC ACCTGCACCA ACGCCCTGAT CAACACCGGC
GATGGCATGA GCATGGCCCT GCGCGCGGGC ATCCCGCTGC AGGACATGGA GTTCTTCCAG
TTCCACCCCA CGGGCATCGC CGGGCGCGGC ATGCTGATCA CCGAGGGCGC CCGGGGTGAG
GGCGGCTATC TGCTCAACGC CGATGGCGAG CGCTTCATGG AGCGCTACGC GCCCAACGCC
AAGGACCTGG CCAGCCGCGA CGTGGTGAGC CGCGCGATCT ACACGGAGGT GAAGGAGGGC
AGGGGTTGCG GACCGGAGAA GGACTATGTG CTGCTGCAGC TGACCCACCT GGGCCGGGAC
AAGATCATGC AGCGACTGCC GGGCATCCGG GAAACCTGCA TCACCTTCCT GGGACTCGAT
CCCATCGATC ACCCCATCCC CATCTACCCG ACCGCCCACT ACACCATGGG TGGCATCCCC
ACCAACCGTT TCGGGCAGGT GGTGGTGCCG GTCAAGGACA CGCCGGAGGA TCCGGTGCCG
GGGCTGTATG CGGCGGGTGA GGCGGCCTGT GTCTCGGTCC ACGGCGCAAA CCGCCTGGGC
GGGAATTCCC TGCTGGACAT CCTGGTGTTC GGCCGCGCCG CGGCCAATCA CATCATCGAC
GTGCTCGAGC ACAACCGTTA TCACCGTCCC CTGCATCAAC CCGCCGTGGA TGCGGCCCTG
GAGCGCTTCC ACCGCTGGGA CCGCAAGGGC GACGGCGAGC ACGTGGACCA GCTGCGACAG
GAACTGCGCA AGGTCATGGA GGCCCACTGC GGTGTGTTCC GGACCGAAGA GGTCATGGCC
GAGGGCGTGG CCAAGGTCAA GGCCATCGCC GAGCGGGTCA AGGACGCGGT GCTGCGGGAT
CACAGCAAGG TCTTCAACAC CGCCCGTGTG GAGGCCATGG AGCTGGAAAA CCTGGTGGAC
TGCGCGCTGG CCACGGTGCA ATCGGCCCTC GGGCGCAAGG AAAGCCGCGG CGCCCACTCG
CGCATCGACT ATCCCGATCG CGACGACACC CACTGGCTCA AGCACACCCT GTACTTCAAG
CACAGCGACA GCCTGGATTA CAAACCGGTG CGCACCAAGC CCATGACCGT CGAGAGCTTC
CCGCCCAAGG TTCGGGTGTA CTGA
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| Protein sequence | MGVTVRKFDA LIIGAGGAGL RAALQLANAE ASVAVVSKVF PTRSHTVAAQ GGVNAALANV
LPDSWHWHMY DTVKGSDWLG DQDAIEYMCR AAPKVVYELE HFGVPFSRLD NGNIYQRAFG
GQSQHFGKEQ AARTCAAADR TGHAILHSLY QQNIRAKTHF FDEYFAVDLL KDEEGYVLGA
LAFEILTGEP IVIEAKTTLL ATGGVGQLFR TCTNALINTG DGMSMALRAG IPLQDMEFFQ
FHPTGIAGRG MLITEGARGE GGYLLNADGE RFMERYAPNA KDLASRDVVS RAIYTEVKEG
RGCGPEKDYV LLQLTHLGRD KIMQRLPGIR ETCITFLGLD PIDHPIPIYP TAHYTMGGIP
TNRFGQVVVP VKDTPEDPVP GLYAAGEAAC VSVHGANRLG GNSLLDILVF GRAAANHIID
VLEHNRYHRP LHQPAVDAAL ERFHRWDRKG DGEHVDQLRQ ELRKVMEAHC GVFRTEEVMA
EGVAKVKAIA ERVKDAVLRD HSKVFNTARV EAMELENLVD CALATVQSAL GRKESRGAHS
RIDYPDRDDT HWLKHTLYFK HSDSLDYKPV RTKPMTVESF PPKVRVY
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