| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1460 |
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| Symbol | |
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| ID | 7315171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1563029 |
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| End bp | 1564753 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643616351 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002513531 |
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| Protein GI | 220934632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCCC TGCGCACCAT CAGACGCCGG CAGCCACCCA CGGGCGTGGC CCTGCCCCGG
GGCGATGTCC TGGCACGCGT GCTGGCCCTG CGGGGCGTGC TCGATCCGGC CCAGTGTGAT
TATGGTCTGA AGGGGCTTGC CGCCCCGCAT CTGCTCTCTG GCATCGAGCC GGCCGTGGAG
CGGCTCGAGC GTGCCCTGCG CAGTGATGAG CGCATCGTGG TGGTCGGGGA CTTCGATGCG
GACGGCGCCA CCAGCACCGC CGTGGCCCTG CGGGCGCTCT CCGCACTGGG TGCGCGGGAT
GTGCATTTTC GGGTGCCCAA CCGCTTTGAG TACGGCTACG GGCTGACGCC CGAGATCGTC
TCGGTGCTGC GTCCTCTGGA CGCCGGTCTG CTCATCACCG TGGACAACGG CGTCTCGAGC
CTGGACGGTG TGGCCGCCGC GCGCCATGCG GGCATGTCGG TGCTGGTGAC CGACCATCAC
CTGCCCGGGA CATCGCTGCC CGAGGCCGAC GCCCTCGTCA ACCCGAATCT TCCCGGCGAC
CCCTTTCCCA GTAAGCACCT GGCCGGGGTG GGCGTGATCT TCTACGTGAT GCTCGCCCTG
CGCGCACGCC TGCGGGACAG CGGCTGGTTC GACACCCGCG GCATCGACGA ACCCAACCTG
GCGGAATTGC TGGATCTGGT GGCCCTGGGG ACCGTGGCCG ATGTGGTGCC GCTGGACCAG
AACAACCGCA TCCTGGTGGA GCAGGGCCTG CGACGCATCC GCGCCGGCGC GGCGATCCCC
GGCATCGGTG CACTCCTGGA GGTGGCGAGG CGAAGCCCGG AGCGCAGCGT CGCCACGGAT
CTGGGCTTTG CCGTCGGTCC GCGCCTCAAT GCCGCCGGCC GTCTGGACGA CATGGCCCTG
GGCATTCGCT GTCTGCTCAC CGATGACCCG GTCGAGGCCC GTGCCCTGGC GGCCGCCCTG
GACGATCTCA ATGCGGATCG TCGCGACATC GAGGCGCAGA TGCAGGCGGA GGCCCTGGCA
GGCCTCGAGG CCCTGCCGGT GGACTCCTGG GGGGATCGCT ACGGGGTGTG CCTCTACGAA
CCCCAGTGGC ACCAGGGGGT CATCGGCATC CTGGCCGCGC GCATCCGCGA GCGCATCCAC
CGCCCGGTGA TCGCCTTCGC CGATGCCGGT GATGGCCAGA TCAAGGGTTC CGCACGCTCC
ATCCCGGGGC TCCATATCCG CGATGCGCTG GATGACGTGG CCGCGCGCCA TCCCGGCCTG
ATCAGCAAGT TCGGCGGTCA TGCCATGGCG GCAGGCCTGA GCCTGCCGCT GGAAAATCTC
CAGGCCTTCA GCGAGGCCTT CGATCACACC GTCGCCGCGC GCGTCTCACC CGAGGACCTG
GAAGGTGTCG TGCACAGCGA CGGCGAACTT ACACCGGGCG AGATCAGCCT GGACACCGCC
ACGCGCCTGC GGGATGCCGG TCCCTGGGGT CAGGGCTTCC CGCCCCCGGT GTTCGACGGG
GAATTCGAGA TCCTGGATCG ACGGGTGCTC AAGGAACGCC ACCTGCGCCT GCAACTGCGC
CCTGCTCCGG GTGCACCGCC CATCACCGGC ATTGCCTTCA ACGTGGACTG GGACGACTGG
CCGGAGGCAC TGGACCGGGT ACGCCTGGCC TACCGGCTGG AGGTCAACGA ATACCAGGGC
CTGGTCAGCC CCCAGCTGAT GATCGAGCAC GTGGAGAGGT GCTGA
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| Protein sequence | MKALRTIRRR QPPTGVALPR GDVLARVLAL RGVLDPAQCD YGLKGLAAPH LLSGIEPAVE
RLERALRSDE RIVVVGDFDA DGATSTAVAL RALSALGARD VHFRVPNRFE YGYGLTPEIV
SVLRPLDAGL LITVDNGVSS LDGVAAARHA GMSVLVTDHH LPGTSLPEAD ALVNPNLPGD
PFPSKHLAGV GVIFYVMLAL RARLRDSGWF DTRGIDEPNL AELLDLVALG TVADVVPLDQ
NNRILVEQGL RRIRAGAAIP GIGALLEVAR RSPERSVATD LGFAVGPRLN AAGRLDDMAL
GIRCLLTDDP VEARALAAAL DDLNADRRDI EAQMQAEALA GLEALPVDSW GDRYGVCLYE
PQWHQGVIGI LAARIRERIH RPVIAFADAG DGQIKGSARS IPGLHIRDAL DDVAARHPGL
ISKFGGHAMA AGLSLPLENL QAFSEAFDHT VAARVSPEDL EGVVHSDGEL TPGEISLDTA
TRLRDAGPWG QGFPPPVFDG EFEILDRRVL KERHLRLQLR PAPGAPPITG IAFNVDWDDW
PEALDRVRLA YRLEVNEYQG LVSPQLMIEH VERC
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