| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1420 |
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| Symbol | |
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| ID | 7315129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 1519619 |
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| End bp | 1520563 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643616310 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002513492 |
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| Protein GI | 220934593 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACA AAACCAGTGA AGGCATGGAC ACCGACAGCG ACGTCTACAG GACGCTGCTG
GAATCCACCC GTGCAATCCC CTGGAAGATC GACTGGCAGA CCATGCAGTT CGCCTACATC
GGACCCCAGA TCGAGGCCCT GCTCGGCTGG AGCCAGGACA GCTGGGTGAG CGTCGAGGAC
TGGGCGCAGC GCATGCACCC CGAGGATCGG GACAAGGTGG TCAATTTCTG CGTAAGCCAG
TCCCGGGCCG GAACGGATCA TGAGGCGGAT TACCGGGCCC TGACCGCCGA TGGCCGTTAC
GTGTGGATCC GCGACGTGGT GCACGTGGTG CGCAACGAGG ACGGCGAGGT GCAGGCCCTG
GTGGGCTTCA TGTTCGACAT CAGCGAGCGC AAGAAGACCG AGCAGGAACT GGTCCGCCTG
CAAAAGGAGC TGGAGGAGCT TTCCTTCAAG GACGGCCTGA CCGGCCTGGC CAACCGGCGC
ATGTTCGACT CGGTGCTGTC GCTCGAGTGG AGCAATGCCC GGCGCAACCA CCAGCCGTTG
TCCCTGATCC TGCTGGATAT CGATTATTTC AAGCAGTACA ACGACTGTTA CGGCCATCTG
CAGGGTGACG ATTGCCTGAT GCGCGTTGCC CGGATCCTGG AGTCCGCCGC CACCCGCGCC
CGGGACTTCA TCGCCCGCTT CGGTGGCGAG GAGTTCGTGC TGATCCTGCC CGAGACCGAT
GCGCAGGCGG CGGAGAAGGT GGCCCAGCGT TGCCGTACCC TGATCCTGGA TGCCGGGATT
CCCCATGAGA GTTCCGAGTC CTTGCCGTTC CTGACCGCGA GCCTCGGAGT CAGCACCATC
ATCCCTTCCC ATGGGGACGA GCCGGGCGAG TTCGTGGATG AGGTGGACAG GCTGCTGTAC
AAGGCCAAGC AGGAAGGCCG CAACCGGGTC GAGTCGCTCG TGTAG
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| Protein sequence | MKDKTSEGMD TDSDVYRTLL ESTRAIPWKI DWQTMQFAYI GPQIEALLGW SQDSWVSVED
WAQRMHPEDR DKVVNFCVSQ SRAGTDHEAD YRALTADGRY VWIRDVVHVV RNEDGEVQAL
VGFMFDISER KKTEQELVRL QKELEELSFK DGLTGLANRR MFDSVLSLEW SNARRNHQPL
SLILLDIDYF KQYNDCYGHL QGDDCLMRVA RILESAATRA RDFIARFGGE EFVLILPETD
AQAAEKVAQR CRTLILDAGI PHESSESLPF LTASLGVSTI IPSHGDEPGE FVDEVDRLLY
KAKQEGRNRV ESLV
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