Gene Tgr7_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1408 
Symbol 
ID7315117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1508071 
End bp1508616 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content77% 
IMG OID643616298 
ProductTPR repeat-containing protein 
Protein accessionYP_002513480 
Protein GI220934581 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.153837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAT TCCTGCGTCT GGTGCCCGCC CTCGCGGCGG TGCTGGTCCT TGCCGCCTGC 
GCCCCGCCCC AGGCGACCCG TCCCGATGGT GCCCCGGGTC CTGCCGGGGA AGTGTCCACG 
GATCCCCAGA TCGCCCCGGT CCCCCTGGGG GCCCCTGACG CCCGTCCCGC CATCGCCCGC 
GAGCCCGCAC CGGCCGACAC CCGCACGGGC GGTGCCGATG CGGTGGTGGC GCTGATGAGC 
GAGGCGGATC GGCAGCTGGT GGCCGGCAAC GCCGACGGCG CCGCCGCTTC CCTGGAACGG 
GCCCTGCGCA TCGACGCCCG CGACCCGCGC GTGTGGCAAC GCCTCGCCGT GGTGCGACTG 
CAGCAGGGCC AGCCCGCCCA GGCCGAGGCC ATGGCGGTGC GCTCCAACGG ACTGGCCCGG 
GGCGACCGTG CCCTGATGGC CCGCAACTGG CGCATCATCG CCGAGGCCCG GCGCATGGCC 
GGCAACGCCG CCGGCGCACG CGAGGCCGAC GCCCGCGCCA ACCAGCTCTC CGGCGAGCCC 
GGATGA
 
Protein sequence
MQRFLRLVPA LAAVLVLAAC APPQATRPDG APGPAGEVST DPQIAPVPLG APDARPAIAR 
EPAPADTRTG GADAVVALMS EADRQLVAGN ADGAAASLER ALRIDARDPR VWQRLAVVRL 
QQGQPAQAEA MAVRSNGLAR GDRALMARNW RIIAEARRMA GNAAGAREAD ARANQLSGEP 
G