Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1333 |
Symbol | |
ID | 7317825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1431643 |
End bp | 1432416 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643616223 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_002513405 |
Protein GI | 220934506 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.762927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTTCA CCACCGCTGA AATCACCGCC TGGATCGGGT CACTGCTGTG GCCCTTCCTG CGTATCAGCG CCATGCTGCT GGCCGCGCCC CTGTACGGCG CCGGGACCGT GACCGTGCGC GTGCGGCTGG CCATCGCCTT CATCCTCGCC CTGGTGGTGG CGCCGCTCAT TCCGCTGCCG CCGGCGGTGG AGCCCCTGAG CCTGGCCGGG CTGGTGGTCA GCGTGCAGCA GATCCTCATC GGCCTGACCA TCGGCTTCGT GCTGCAGATG GTGTTCGCCG CGCTCACCCA GGCGGGCGAG GCCATCGCCC TGTCCATGGG CCTGGGTTTC GCCTCCATGG TGGATCCCCA GTCCGGCGTG CAGGTGCCGG TGGTCTCCAG CTATTTCGTG ATCATGTCCA CGCTGCTGTT CCTGGCCCTC AACGGCCACG TGGCCCTGAT CGAGCTGACC CTGCTGAGTT TCCAGGCCCT GCCGGTGGGC GTGGAAGGGG TCACCCGCGA AGGGCTCTGG GCCCTGGTGA GCTGGGGCAG CACCATGTTC CTGTATGCCC TGCTGGTGGC CCTGCCGGCA GTGGCCTCCA TGCTGCTGGT CAACCTGTCC ATGGGCGTGA TCACCCGCGC CGCGCCGCAG CTCAACATCT TCGCCGTGGG CTTTCCCATG ATGATCATGC TGGGTTTCAT CCTGCTGCTG CTCACCACCC CGGTGCTGCT GCCCAAGTTC ACGGAACTGC TGGCCAGCGG TTTCGACCTG ATGGGCATCC TGACGAGGCA ATAG
|
Protein sequence | MNFTTAEITA WIGSLLWPFL RISAMLLAAP LYGAGTVTVR VRLAIAFILA LVVAPLIPLP PAVEPLSLAG LVVSVQQILI GLTIGFVLQM VFAALTQAGE AIALSMGLGF ASMVDPQSGV QVPVVSSYFV IMSTLLFLAL NGHVALIELT LLSFQALPVG VEGVTREGLW ALVSWGSTMF LYALLVALPA VASMLLVNLS MGVITRAAPQ LNIFAVGFPM MIMLGFILLL LTTPVLLPKF TELLASGFDL MGILTRQ
|
| |