Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tgr7_1289 |
Symbol | alaS |
ID | 7317778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thioalkalivibrio sp. HL-EbGR7 |
Kingdom | Bacteria |
Replicon accession | NC_011901 |
Strand | + |
Start bp | 1383465 |
End bp | 1386062 |
Gene Length | 2598 bp |
Protein Length | 865 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643616177 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_002513362 |
Protein GI | 220934463 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG CCGACTTAAG AACGAGCTTC CTCGAATACT TCAGGTCCAA GGGCCACGAG GTGGTGCCTT CGAGCCCGCT GATCCCGGGC AACGATCCCA CCCTGTTGTT CACCAATGCC GGCATGGTGC AGTTCAAGGA TGTCTTCCTG GGTCGTGAGC AGCGCCCTTA CGTGCGCGCC ACCAGCTCCC AGCGCTGCGT GCGCGCCGGC GGCAAGCACA ATGATCTCGA AAACGTGGGC TACACCGCAC GTCACCACAC CTTCTTCGAG ATGCTGGGCA ACTTCAGCTT CGGCGACTAC TTCAAGCGCG AGGCCATCCA GTACGCCTGG GAGTACCTCA CCCAGGTACT CAAGCTGCCC GAGGAAAAGC TCTGGGTCAC GGTGTTCGAG GAGGACGACG AGGCTGCCGA CATCTGGCTC AAGGACGTGG GCGTCAATCC CGAGCGTTTC TCCCGCATCG GCGCCTCGGA CAACTTCTGG TCCATGGGCG ATACCGGCCC CTGCGGCCCC TGTACCGAGA TCTTCTACGA CCACGGCCCC GAGGTTCCCG GCGGCCCGCC CGGCACCCCC GAGGCGGACG GCGACCGCTA CATCGAGATC TGGAACCTGG TGTTCATGCA GTACGACCGG GCCAAGGACG GCACCCTGAC CCCGCTGCCG CGTCCCTCGG TGGACACCGG CATGGGCCTG GAGCGTCTGG CCGCCGTCAT GCAGGGCGTG CACTCCAACT ACGAGATCGA CCTGTTCCAG AACCTGATCC GCGCCATCCG TGACATGGCG AAGGGCGCGG ATCCCACGAG CCCTTCCCTG CGGGTGATCG CCGATCACAT CCGCTCCTGC AGCTTCCTGG TGGCCGACGG CGTCATGCCC GCCAACGAGG GCCGCGGCTA CGTGCTGCGC CGGATCATCC GCCGCGCCGC CCGTCACGGC CACAAGCTGG GCCTGGATGA GCCCTTCTTC CACCGTCTGG TGGGCCCCCT GGTGGCCGAG ATGGGCGAGG CCTACCCGGA GCTGGTCAAG GCCCAGCCCA TGGTGGAGCG GGTGCTGCGC CAGGAAGAGG AGCGCTTCGC CGAGACCCTG GAGAAGGGCC TGCGCATCCT GGAAGAGGAC ATCGACGGGC TCAAGGGCAC CGAGATCCCC GGCAAGACCA TCTTCGTGCT CTACGACACC TACGGCTTCC CCGTGGACCT GACCGGCGAC ATCGCCCGGG AGCGGGGCCT GACCCTGGAC ATGGCCGGTT TCGAGGCGGA GATGGAGATT CAGCGCGAGC GCGCCCGGGC CGCCAGCCAC TTCGATGCGG ACTACCACCG CAAACTCAAG ATCGAGGGCG AGAGTGCCTT CACCGGCTAC GAACACCTGG ATGGACAGGG CCGGGTCACC GCCCTGTTTA AGGACGGCGA ACCCGTGGAC GCACTGGCAT CCGGCGAGCA CGGTCTGGTG GTGCTCGATG AGACGCCTTT CTACGCAGAA TCCGGCGGCC AGGTGGGTGA TACCGGCGAG TTGCTCGCCG AGGGCGTGAT CTTCGAGGTC ACCGACACCC GCAAGCACGG CGCCGCCCAC GCCCACATGG GTCGCGTGGT GGAAGGGCGC ATTGCCCAGG GCGACGTGCT GGGTGCGAAG GTCAACCAGG CCCGCCGCCA GGCGGTGGTC CTGAACCATT CCGCCACCCA CCTGATGCAC GCCGCATTGC GGGAGATCCT GGGCGATCAC GTGCAGCAGA AGGGCTCCCT GGTGGCCCCC GACCGTCTGC GTTTCGACTT CTCCCATTTC CAGCCCGTGA GCGCCGAGGA ACTGGAGCGC ATCGAGCGCC GCGTCAATGA GGCCATCCGC GCCAATGCCG AGGCCGAGGC GCGCATCATG CCCATCGACC AGGCCCTGGA GTCCGGGGCG ATGGCCCTGT TCGGCGAGAA ATACGGCGAT GAGGTGCGGG TGCTGTCCAT GGGCGGCTTC TCCACGGAGC TTTGCGGCGG CACCCACGTG CGTCGCACCG GCGACATCGG CGTGTTCAAG ATCCTCTCCG AGTCCGGCGT GGCCTCGGGC ATCCGCCGCA TCGAGGCGGT CACCGGCGAG AACGCCCTGA ACTACATCGG CGAGACGGAA AAGAACCTCT CCCGCATCGC GGAGATGGTC AAGGCCGGCC GCGGCGACCT GGACGAGAAG GTCGCCCTGC TCGTGGAGCG CAGCCGCCAG CTGGAAAAGG AACTGGAGGC CCTCAAGGGC AAGCTGGCCA GCGCCGCCGG TTCCAGCCTC GCCGATCAGG CCGTGGAGGT GAACGGCATC AAGGTGCTGG CCGCCAACCT GGAAGGCGCC GATCCCAAGT CCCTGCGCGA CACCGTGGAC CAGCTCAAGA ACAAGCTGGG CGAGGCCGCC GTGGTGCTGG CCACGGTCAA GGACGGCAAG GTGAGCCTGG TGGCCGGCGT GACCCAGGGC CAGACCGCGC GCCTGAAGGC CGGTGAACTG GTCAATGCCG TGGCCCAGCA GGTGGGTGGC AAGGGCGGCG GACGGCCGGA CATGGCCATG GCCGGCGGCA CCGACCCCTC GGGACTGCCC GGTGCGCTGG CCTCGGTGCC CGACTGGGTC CGCGAACGGC TGGGCTGA
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Protein sequence | MKSADLRTSF LEYFRSKGHE VVPSSPLIPG NDPTLLFTNA GMVQFKDVFL GREQRPYVRA TSSQRCVRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKREAIQYAW EYLTQVLKLP EEKLWVTVFE EDDEAADIWL KDVGVNPERF SRIGASDNFW SMGDTGPCGP CTEIFYDHGP EVPGGPPGTP EADGDRYIEI WNLVFMQYDR AKDGTLTPLP RPSVDTGMGL ERLAAVMQGV HSNYEIDLFQ NLIRAIRDMA KGADPTSPSL RVIADHIRSC SFLVADGVMP ANEGRGYVLR RIIRRAARHG HKLGLDEPFF HRLVGPLVAE MGEAYPELVK AQPMVERVLR QEEERFAETL EKGLRILEED IDGLKGTEIP GKTIFVLYDT YGFPVDLTGD IARERGLTLD MAGFEAEMEI QRERARAASH FDADYHRKLK IEGESAFTGY EHLDGQGRVT ALFKDGEPVD ALASGEHGLV VLDETPFYAE SGGQVGDTGE LLAEGVIFEV TDTRKHGAAH AHMGRVVEGR IAQGDVLGAK VNQARRQAVV LNHSATHLMH AALREILGDH VQQKGSLVAP DRLRFDFSHF QPVSAEELER IERRVNEAIR ANAEAEARIM PIDQALESGA MALFGEKYGD EVRVLSMGGF STELCGGTHV RRTGDIGVFK ILSESGVASG IRRIEAVTGE NALNYIGETE KNLSRIAEMV KAGRGDLDEK VALLVERSRQ LEKELEALKG KLASAAGSSL ADQAVEVNGI KVLAANLEGA DPKSLRDTVD QLKNKLGEAA VVLATVKDGK VSLVAGVTQG QTARLKAGEL VNAVAQQVGG KGGGRPDMAM AGGTDPSGLP GALASVPDWV RERLG
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