| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1280 |
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| Symbol | |
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| ID | 7317769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | - |
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| Start bp | 1373496 |
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| End bp | 1376372 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643616168 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit B |
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| Protein accession | YP_002513353 |
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| Protein GI | 220934454 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTCGG GACAGGCCAC CCGGATTGAG GGTGCTGCCC CCGGCACCGA CCCCCTCGAG
CAACTGGCCC GACGCATCGT CGAGGACCAC CGGGACCGGC TCCCGGATCT CACCTCAGTC
ACCCTCCTGC GTCCCCGTGC CCACGGGGAC GCGCGTTTGC GCCGTTTGCT GCTCGCCGCC
GCCCGGGAAC AGGGGGTCGA GGCCCTGCTG GGCCCGCGCA TCACCAGCCT GCGCCAGTGG
GTGATGGAAC AGGACCCCGC GCACGGCGCC CCGCTGCTCG GCGATCACGG CCGTGAACTG
ATGCTCTTCG AAGCGCTGCG GGAACACCCG CAGCTGTTCG AGCGCCACGA TACCTGGCGC
CTGGTGGACA CCCTGCTGGA ACTGTTCCGG GAACTGACCC TGAGCGGCGC CACCCCGCCC
GCCGCCTACG AGGCCTTCGT ACAGAGGCTG CGCGAGGCCT ACGGGCTGGG CGGTGATGAT
TCGGCCTGCC TGGAACCCTT GGGTCGTGAG GCCCGCATCG TGCACACCCT CTGGCACGCC
TGGCTGGAGC AGCAGCGGCA GGAAGGCCGG GAAGACCCGG ATGCCCGCTA CCTGCGTGCC
CTGGCATGCC TCGAACCCGG CAACATCCCC CCAGGCAGCC TGTATGCGGC CGGCTACGAT
GAACTCCTGC CCGCCGAAAC CGCACTGCTC AACGGCCTGA CCCGCGAGGG TCGTCTGCAC
TGGCTGGTGG GATTGCCCGC CGCGCCGGGC ATGCCGCAAC CGACGTCCGA CGGCGCAGAC
CCTCAGACAC CTTTCAGCGC CTTCCTGGAC CAGGCGTTCG ACACCGACGG GGCACCTCTG
CGTGAACGCG CCCTCGCCTT CGCGCAACGC CATCCCAGCA GCCCCGCCAC GCCACGTCTC
GCCCTGCTCG GCGCCGAGGA CGCCGAGGCC CAGGCCGCCG CCCTGGACAT CCGCATCCGC
GCCTGGCTGC TGGAAGGCCA TCGCCACATC GGCGTGGTCA CCGACGACCG GCGCCTGGCC
CGGCGTCTGC GGGCCCTGCT GGAGCGCGCC GGCATCGACC TGGACGACCC GGGCGGCTGG
GCCCTGTCCA CCACCCGCGC CGCCGCCGCC CTGGAACGCT GGCTGGAGGC CCTGGAAGAG
GACTTCGAAT ACCAGCCCCT CATGGACGTG CTCAAGTCCC CCTTCGTGTT CCCGGAGCGC
ACTGAAGAAC ACCTGTTCGC CGTGTACCGC CTGGAACAGG ACGTGATGCT GCGGGAGAAC
ATCCCCAGGA ATCTGGCCCG CATGCGTGAG CACCTGTTCA AGCGAGCCCG GCGACTGGGG
CCGGCCTCCG AGCGCAGCAC CCGGGCGGTG GCCAGCCTGC TGGATGCCCT GGAAGAGGCC
GCCGTGCCTT TCAGGGGTCT GGTGCGGGGC GCGGCCCGGC CCGCCGGCGA TTGGCTGGCC
GCCCTGCAGG AGAGCCTGCG CCGGCTGGGC ATGCAGGCAA GCCTGGAGGC GGACCCCGCC
GGACGCCGGC TGCTGGAGGA AGTGCGCGCC ATGGCCGCAG ACCTCGGCTC GCGGCCGCTG
TCCATGGACT GGCGGGAATT CCGCACCTGG CTGGGGCGGG TGCTGGAGAC CCGTCATTTC
CGCCCCCACC CACGGCCCGC GCCGGTGCGG CTCATGAGCC TCGGCGAGAC CGCGCTGGCC
CGTTTCGACG CCCTGATCAT CGCCGCCGCC GACGGTGAAC ACCTGCCCGG CCACGAACCG
GTGCGCGCCC TGTTCAACGA CGGCGTGCGC CATGCCCTCG GCCTGGAGGC CTGGCATGAC
CGGGTGGCCC GCCAGCAGGG CCGCTTCCGG CGCCTGCTGG AGGCCGCGCC CAGGGTGTTG
ATCACCTGGC AGCGGGAACG GGGCGGCGGC CCGCAGCGCC CCGCCCCCTG GGTGGAACTG
ATCGACGCCT TCCACCGCCT GGCCTGGGGC GCACCGCTCA GGGACGAGGC CCTGGAGGCC
TGGCTCAAGA CGCCCGACGC CCTGGTGCAG AGCCCGGACA CGGCCCCCCT GCCGGCCACC
CCGCAACGTC CGGCACCGCT GCTGCCCGCC GCCCATGTGC CTGCCAAACT CTCGGCCAGC
GCCCACCAGG ATCTGATCGA CTGTCCCTAC CGCTTCTACG CCGCGCGCGG TCTGGGGCTT
GCCCCCCCCG AGGAACTGGC CGAGGCCCTG AGCAAGGCCG ATTACGGCGA ACGGGTGCAT
CTGTGTCTGC AGGCCTTCCA TGGCGGCACG CCGGAACTGC CCGGTCCCTG GCAGGGGCCT
CTCGACGAAG CTCACCGCGC CGAGGCCCAG ACCTTGCTTG AGACCATCAG CAAAGCGGTG
TTCGAAAAGG ACCTGGAAGA CAACTTCATG CACCGGGGCT GGCTCGCCCG CTGGCGCGCC
CTGATCCCCG CCTACCTGGA CTGGGCCATT GAGCGGGCCG AGGCCTGGCA GGTGCAGGAC
ACCGAGGTAT CACGGGAGGT GGCGCTTGCC ACCGGCACGG TCCTCAAGGG CCGTCTGGAT
CGGGTGGATG CGGGCGAAGC GGGCCAGGGC GTGATCGACT ACAAGACCGG TACGCCGCCC
GCTCAGAAGG AAGTGGACGC CGGCGAGGCC GTGCAGCTGC CCACCTATGC CCTGCTGCTG
GAAGACAGCC AGCGGGTGGA ATACCTGCAC CTGGACCGGG ACAAGGTCAA GTCGGGTGCA
AGCCTGGAAG GCGAGGCCCT GACAGCGTTG CGCGAGGCCG TGGCCACGCG ACTGCTGCAG
CTGCTGGAGC GCCTGCGCGC GGGCAGCCCC ATGCCCGCCT GGGGTGACGA GAAGGCCTGC
CAGCATTGCA CCATGGACGT GGTGTGCCGT CGCGGCAGCT GGGAACAGGG CCTTTGA
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| Protein sequence | MSSGQATRIE GAAPGTDPLE QLARRIVEDH RDRLPDLTSV TLLRPRAHGD ARLRRLLLAA
AREQGVEALL GPRITSLRQW VMEQDPAHGA PLLGDHGREL MLFEALREHP QLFERHDTWR
LVDTLLELFR ELTLSGATPP AAYEAFVQRL REAYGLGGDD SACLEPLGRE ARIVHTLWHA
WLEQQRQEGR EDPDARYLRA LACLEPGNIP PGSLYAAGYD ELLPAETALL NGLTREGRLH
WLVGLPAAPG MPQPTSDGAD PQTPFSAFLD QAFDTDGAPL RERALAFAQR HPSSPATPRL
ALLGAEDAEA QAAALDIRIR AWLLEGHRHI GVVTDDRRLA RRLRALLERA GIDLDDPGGW
ALSTTRAAAA LERWLEALEE DFEYQPLMDV LKSPFVFPER TEEHLFAVYR LEQDVMLREN
IPRNLARMRE HLFKRARRLG PASERSTRAV ASLLDALEEA AVPFRGLVRG AARPAGDWLA
ALQESLRRLG MQASLEADPA GRRLLEEVRA MAADLGSRPL SMDWREFRTW LGRVLETRHF
RPHPRPAPVR LMSLGETALA RFDALIIAAA DGEHLPGHEP VRALFNDGVR HALGLEAWHD
RVARQQGRFR RLLEAAPRVL ITWQRERGGG PQRPAPWVEL IDAFHRLAWG APLRDEALEA
WLKTPDALVQ SPDTAPLPAT PQRPAPLLPA AHVPAKLSAS AHQDLIDCPY RFYAARGLGL
APPEELAEAL SKADYGERVH LCLQAFHGGT PELPGPWQGP LDEAHRAEAQ TLLETISKAV
FEKDLEDNFM HRGWLARWRA LIPAYLDWAI ERAEAWQVQD TEVSREVALA TGTVLKGRLD
RVDAGEAGQG VIDYKTGTPP AQKEVDAGEA VQLPTYALLL EDSQRVEYLH LDRDKVKSGA
SLEGEALTAL REAVATRLLQ LLERLRAGSP MPAWGDEKAC QHCTMDVVCR RGSWEQGL
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