Gene Tgr7_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_1233 
Symbol 
ID7315485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand+ 
Start bp1324081 
End bp1324980 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID643616121 
ProducttRNA synthetase class II (D K and N) 
Protein accessionYP_002513306 
Protein GI220934407 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 
TIGRFAM ID[TIGR00462] lysyl-tRNA synthetase-like protein GenX 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.685644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCCG GGATACGTGC CTTCTTCGCC GGGCGCGGCG TGCTGGAGGT GGAGACCCCC 
ATGCTCTCCC GGGCCGCCGC CACCGATCCC GCCCTGGAAA GCCTGGTGGC CGGTACCGAT 
GCCGGGTACC GTTACCTGCA CACCTCGCCC GAATTTCCCA TGAAGCGCCT GCTGGCGGCG 
GGCAGCGGCG ACATCTACCA GATCGCCCGG GTATTTCGCG CCGGCGAGGC GGGGCGTTAT 
CACAACCCCG AGTTCAGCCT GCTGGAGTGG TACCGGCTGG ATTTCGATGA GCACCGGCTC 
ATGGACGAGG TGGAGGCCCT GGTACGAACG CTGGCCGCTG CAAACGATCC CGGCCCTGCC 
GAGCGTCTGG ACTACGCCGA GGCCTTCCGC CGCCATGCCG GGCTCGATCC CTTCGCGGCC 
ACGGTCGCTG AACTGTCCGC CAATGCGGCA GACCATGGCA TCGCCTTCTC CGGCGAACTG 
GACCGGGACG GCTGGCTGGA CCTGCTCATG AGCCAGGTGG TGGCGCCGGC CTTTCCCGCC 
GGGCGCCTGA TCTTCATCCA CGGCTACCCC GCCAGCCAGG CGGCGCTCGC CCGCCTGCGC 
CCTGGTGATC CGCCCACCGC TGCCCGCTTT GAGCTGCACT GGGGCTCCCT GGAACTGGCC 
AACGGGTTCC ACGAACTGAG CGATGCCGAC GAACAGGCGG CCCGTTTTGC ACGGGATCTG 
GCGATCCGTC AGGCGCGGGG TCTGCCCGAG GTGCCCGTGG ACCGGCACCT GCTGGCGGCC 
CTGCAAGCGG GCCTGCCCGA CTGCGCCGGC GTGGCCCTGG GCCTGGACCG GCTGCTCATG 
TGCCTGACCG GCGCCTCGCA CATCGACCAG GTGCTGGCCT TTGCCTGGGA TCGTGCGTGA
 
Protein sequence
MHAGIRAFFA GRGVLEVETP MLSRAAATDP ALESLVAGTD AGYRYLHTSP EFPMKRLLAA 
GSGDIYQIAR VFRAGEAGRY HNPEFSLLEW YRLDFDEHRL MDEVEALVRT LAAANDPGPA 
ERLDYAEAFR RHAGLDPFAA TVAELSANAA DHGIAFSGEL DRDGWLDLLM SQVVAPAFPA 
GRLIFIHGYP ASQAALARLR PGDPPTAARF ELHWGSLELA NGFHELSDAD EQAARFARDL 
AIRQARGLPE VPVDRHLLAA LQAGLPDCAG VALGLDRLLM CLTGASHIDQ VLAFAWDRA